| Annotation |
|---|
| Description | jgi|Araly1|488786|fgenesh2_kg.6__1920__AT5G19020.1 |
| Sequence |
ATGCTCCATC TCCTCTTCGT CTGCTCCTCC GCCGCCTCCA CCACCACCGC CGCAAAAGAA GATTCCACCA GCATGCCCCC ATCCTCTAGA TCTGCCGCTA ATCAAAGCTC CTCCTCTTCT CTCCATCTCT GCAAACATTC ACCGTCGGCG ACTCTCGACC TCTTAATCCT AATCCTCGTC CTCTTCTCCG GCACATTCCT CCTCTCCTCC TACTTCTCCT ACCTAATCCA CTCCTTATCG CTCCTCTCCT CTCATTTCCC TTCAATCGCC ATCTCCTTCT CTTCTCTCCT CCCTCCTCTA ATCTTCTTCT TCTCCTCCGA TCACAACACC GAAGATGAAG ATCATCATCC CTCCGGAATA ATTCCACCTC CGGCATCGTT CTTCTTCGCA TTCGCTGTCT TCTTCGCGGC GTCAATTGCG TTTCTGGACC TATGTTGTGG TTCAAGGTCG AGGAAATGTC GTAACCGTAA GTGTAAAGGA ATGAAGAAAG CTATGGAGTT TGATTTGCAG TTACAGACAG AGGAATGTGT TAAATCGGGT TCGGTTAAGG AGATTGATCG GTTACCGTGG AAAGGAGGTA GTGAGAGTAA TCCTGATTAT GAGTGTTTGA GAGCTGAGCT GAGGAAGATG GCTCCGGTTA ATGGTCGAGC TGTTTTGATT TTCCGATCAA AATGTGGTTG CCCTATTGCT AAGCTTGAAG GTTGGGGACC TAAGAGAGGC CGGCGTCATA AAAATTGGAA CTTGGTGACT AGTGAATTTG TAGGTTCTGT TAATCCTGTT CCTGCTACGT TTTTATTGCC GTTGATCAGT TTGAGACCAG CGAGATATTT CTCCTTTCCG AGTCTGACCC ACTTCGATTT CTCCGGCGAG AGCTCCAATA TTGAACGAGC TCTTGTCTCC GCTCTTGGAT CGTGCGCGTC CAGTAATGAC GTCACTTTTG GCAGACAAAT CCATGGCCGT GTCTTGAAAT CAGGTCATGA TTCTAATGGA TTCATCTGTA ATAGCGTTCT TAACATGTAC GCTAAATGCC GTCTCTTGGT CGATGCGGAA TCTGTTTTCC GGGCTCACGC GAAGCTTGAT TCTGCTTCGT TCAATATTAT GGTTGATGGG TATGTTAGAT CTCGGAGACT TGGAGATGCG CTTAAGTTGT TCGACGTTAT GCCTGAGAGA AGCTGTGTCT CGTATACTAC TTTGATAAAG GGTTATGCTC AAAACAATCA GTGGAGTGAA GCTATGGAGC TTTTTAGGGA GATGAGAAAT TTGGGAATTA TGCTAAATGA AGTGACTTTA GTCACTGTTA TATCTGCTTG CTCACATTTG GGTGGGATTT GGGATTGTAG GATGTTGCAT AGTTTGGCTA TTAAACTCAA GCTTGATGAT CGGGTTTTTG CTTCGACGAA TTTGCTGCTT ATGTACTGTA TCTGCTCATG TTTGAAGGAT GCTCGGCAGT TGTTTGATGA AATGCCTGAG AGAAATTTAG TTAGTTGGAA CGTGATGTTA AATGGGTACT CAAAAGCTGG ACTTATCGAA CAAGCTAAGG AATTGTTTGA TCAGATTACT GAGAAAGATA TTGTCTCGTG GGGTACAATG ATTGATGGGT GTCTCCGAAA GAATCAGCTT GACGAAGCTC TTGTTTACTA CACCGAGATG CTGCGCCGTG GAATGAAGCC TAGTGAAGTT ATGATGGTGG ACCTTCTCTC TGCTTCAGCT CGATCAGTAG GCAGTTCCAA AGGTTTGCAG CTTCATGGTA CCATCGTGAA AACGGGTTTT GATTGTTATG ATTTCTTACA AGCAACGATC ATATATTTCT ACGCTGTCTC AAATAACCTG AAACTCGCTC TTCAGCAGTT TGAAGCGAGT GTTAAGGACC ACATTGCATC GAGAAACGCG TTGATTGCAG GATTTGTGAA GAATGGAATG GTTGAGCAGG CAAGAGAAGT ATTTGATCAG ACTCGTGATA AAGATATCTT TTCATGGAAC GCTATGATGT CGGGTTACGC GCAGAGTTTA TCGCCTCAGT TAGCTCTACA TCTCTTCCAC GAAATGATCA GTAGTAGCCA AGTAAAACCA GATGCAATCA CAATGGTTAG TGTTTTCTCT GCAATTTCTT CTCTAGGATC GTTGGAAGAA GGGAAAAGAG CGCATGAGTA TCTAAACCGT AGCTCGATTC CTCCTAACGA CAATCTGATC GCTGCTATAA TTAACATGTA CGCCAAATGT GGAAGCATCA AAACCGCTCT AAACATTTTC CGCCAAACAA AGAACATTTT TTCTTCTACA ATCTCTCCGT GGAACGCCAT CATTTGCGGG TCAGCGACAC ATGGCCACGC AAAACTAGCA CTTGATCTCT ACTCCGATCT CCAATCTCTC CCAATAAAAC CAAACAGCAT CACTTTTGTC GGTGTCTTGA GCGCCTGCTG CCATGCAGGC CTAGTGGAGC TAGGTAAAAC GTATTTCGAA AGCATGAAGA GCGATCACGG GATCGAGCCA GACATCAAGC ATTACGGATG TATGGTTGAT TTGTTGGGAA AAGCTGGGAA GTTAGAGGAA GCAAAAGAAA TGATCAAGAA GATGCCGGTT AAGGCTGATG TGATGATCTG GGGGATGTTA TTATCGGCTT CACGGATTCA CGGGAACGTC GAGGTTGCTG AGCTTGCGGC TACTGAGCTG GCAGCAATTG ATCCATCTCA CGGAGGATGC AAAGTTATGC TTTCGAACGT TTATGCAGAC GCAGGGAGAT GGGAAGATGT AGCTTTGGTT AGAGAAGTGA TGCAAACAAG AGATGTTGAG TGGTCACGTG CCTTCAGTGG TGTTGTGTGA |
| Length | 2820 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7589025.. 7593331 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G19020.1 |
| Description | mitochondrial editing factor 18 |
| TAIR curator summary | Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. |
| Alias | [MEF18][mitochondrial editing factor 18] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg473379 | GHMP kinase family protein |
| 9.64365 |
Ahg471799 | |
| 14.1421 |
Ahg937176 | F-box associated ubiquitination effector family protein |
| 16.1245 |
Ahg319846 | nucleic acid binding;zinc ion binding;DNA binding |
| 18 |
Ahg900749 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 21.1424 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 25.1595 |
Ahg336756 | |
| 25.923 |
Ahg933675 | poly(ADP-ribose) polymerase 2 |
| 29.6648 |
Ahg316165 | Proteinase inhibitor, propeptide |
| 30.1993 |
Ahg314644 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|