Detail



ID : Ahg488806

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488806|fgenesh2_kg.6__1940__AT5G19210.2
Sequence
CGGAGGTGCT CAAACTCAAA AATGGCGTCC CAGCTTCTTA ATGTTCCTCA TCTCGCTTTC TTCCCTAAAA TCTCACCCTT TAATCCTCCC CTCTTCTCAA CACTAAAGCC CAGTTTCTTC CACTCTACTT CCACTAGCAG AGCTCTCAAA ACCTCCTCCA ACTCTCGGAT TATCAACCTC CAAGCCGTCG CCGAAACTAG CTCTGAAATC GAAAGCAATA GTGCCACTAA CACAGCTGCT TTGACTCTAC GTAAAATCTG CCAAGGTTTT GTCCCCGAGC ATATCTTGCA CAGAATGGAG GAGATTGGGT TTATCTCTCC CACGGATATT CAAAGAGAAG CTCTTCCTAC TTTGTTCACA GGCCGTGATT GCATCCTCCA TGCTCAAACA GGTTCAGGAA AGACGTTGAC TTACCTGTTA CTCATATTCT CTCTTATAAA TCCTCAACGA TCTTCTGTGC AAGCTGTTAT TGTTGTTCCC ACTCGAGAGC TCGGTATGCA AGTTACAAAA GTTGCTCGAA TGTTGGCTGC AAAATCGGAG ATTGATGTGA AAGGGTGTAC GGTAATGGCT CTTTTAGATG GAGGGACACT AAGAAGGCAC AAAAGCTGGC TAAAGGCTGA GCCACCAGCA ATTTTGGTTG CTACGGTAGC AAGTTTGTGT CACATGCTAG AAAAACACAT ATTTAGACTT GACTCGGTGA AAGTTCTTGT TGTCGATGAG GTTGATTTCT TATTCTACTC ATCAAAACAA GTTGGTTCTG TGCGGAAGCT TTTGACATCA TTTTCTTCAT GCGATAAACG TCAGACAGTT TTTGCTAGTG CTTCCATACC CCAGCATAAA CATTTTGTGC ATGACTGTAT ACAGCAAAAG TGGACAAAGA GGGATGTTGT CCATGTTCAT GTTAGTGCAA TCATGCCCAT GCCGTTGTGC CTTCTTCACA GATTTGTTAT GTGTGAGAAG ACAAACAAGC ATCAAGTACT GCTTGCCTTG TTAGAGTCTG ATGCACCTGA ATCAGCTATC ATATTTGTAG GGGAGCAGTC TGAGAAGTCA AAAAAGGCTG GAAATGATCC ATCTACAACT CTACTAATGG AATTCCTTAA AACTTCATAT AAAGGCTCGT TGGAGATCCT CCTACTAGAG GGGGACATGA ATTTCAATTC ACGAGCAGCT TCACTAACAG AAATCAGGCA AGGAGGAGGG TTTCTTCTTG TTTCTACTGA TATTGCAGCA AGAGGGATTG ATCTACCAGA AACAACTCAT ATCTTCAACT TTGATCTCCC ACAAACGGTT ACAGATTATC TGCACCGAGC TGGAAGAGCT GGTCGGAAAC CCTTTTCTGA CAGGAAGTGC ATTGTTGCTA ATCTGATCAC GGCAGAGGAG AGATTTGTCT TGCAAAGATA CGAAAATGAA CTTATGTTCA GCTGCGAGGA ACGGATGTTG TAGGTACAGT CTTAAATATC TTGCCTTTGT TTCCTCAATT TTTTCCTAAT GTAACTAACT AATTACATGG GAAGAGTATA TGATAAATGT CATCAATCAT TATCAAATAA ATTTCTTT 
Length1558
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7732978.. 7735477
Download Sequence
A.thaliana
AGI-codeAT5G19210.2
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.7033 Ahg483719 DEA(D/H)-box RNA helicase family protein
26.9444 Ahg331488 Tetratricopeptide repeat (TPR)-like superfamily protein
36.3043 Ahg482168 glutamate receptor 5
39.2428 Ahg941117 Plant stearoyl-acyl-carrier-protein desaturase family protein
39.2428 Ahg477318 Protein of unknown function (DUF 3339)
40.9756 Ahg892739 nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
45.913 Ahg470090 Ribosomal RNA adenine dimethylase family protein
53.5817 Ahg893370 peptide deformylase 1B
55.4527 Ahg480587 pentatricopeptide (PPR) repeat-containing protein
62.6099 Ahg477264 RAD3-like DNA-binding helicase protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression