Detail



ID : Ahg488887

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488887|fgenesh2_kg.6__2021__AT5G19920.1
Sequence
AAAAAATGTG GTTCCAAAAT TGAAACAACG AGAGGGAAAA ATCAATCCCC ACTACGCACG ATCGGGCGGG AATAAAAGGG TGAGGAGGAA GACGAACGGA GACTGCAATG GCTACGACGG CGATGAACAA ACCTAAAATT GAACAAGGGG AAGAAGTAGA AGCAGAAGCG AGAACGTTCT CGACTCAAAT CCCAGATGAT AGAGAAGCTC TTTTAGAGTT CATGGACCAG CGTGCCAAAT CAATCCAACG CCTTAAAGAC CAGATTTCAA GTTTGGACAG GAAGCTTGCT GAAGAGAGAA AACTGATGGC AGATGCTGAG GCGAAATTTT TAAAAATTGA TCGTGTTGAA AATGGTACCT TTTCTAAGCC AAAACCTAAA GTGCCTGGTA AAACTGGAAG TATTCTTGGT ATAGCAGAGT TCTGGACCGA GGGAAATAAG GCAAAGACTG CCAATGAAAA CTCTACTCCA CAATCACGTA GTGAGATGGA ATCCTTGAAA ATGCCATCCA TTATCTTACC CCCTTCTTTC AAACGAAGAG CTTCTGCTCC CGTCAGAGCA GAAGTAAATG AGACCACCCA AGCTCAACCC ATGGCTACAA GGGATTATAA CATCCCAAAG GAAGACACAA GTGGCCCTGA GGCCAAGAGA CCTCGTAGTA TTCCTGATGA AGTAGTAAGG GAAACCCAAG GTCGAGAGAA GGAAGCTCAA CCCATGGCTA CGATGGATTA TAACGTTCCA AAAGAAGACA AAAATGTCCC TGAGGCCAAG AGTTCTCATA GTATTCCTAA TGAAGTGATA AGGGAATCCC AAGGTCGCGA TAACGTAGCT CAACCCATGG ATACAAGGGA TTATAATGTC CCAAAGGATG ACAAAAGTGG TCTTGAGGCC AAGAGATCTT GTAGTATTCC TAATGAAGTG GTGTGGGAAA CTCAAGCTCA AGTTCGAGAT AACCACACTA ATAAGGATTT TGCAAAGCCG AGGATCAGAG TTTCTTCTAA CTTATCCCAA CAAGGACAAC AGGAAAATGC TGAATTCCGA GGACATGATG AGTTGATAGC ACTTATAGGT AGAAGCTCTT TGCGTCCCAC AATTGAAGGT CGTACTGTAG GTATGCTACC AAGTTGCCAC ACGAAAAGAA TGAGAAGTCT TGCTATTTCT CCTTCAAACC GTGAGCTATT TGCTACAAGT GCATTGGATG GGGCAGTTCA TTTCTGGAAG CTTCAGTCTG ATAGGTCCAC AGCTACTTTG TTTAAGACGG TTAATCGGGT AGCAATAGAT CAGAAGAAAT GGGCAGAGGA TATAGCTTGG CATCCACACA AGAGTGCACT TTTCTCTGTG TATACTGCAG ATGAAGGTCA CCCTCAGATA TCAGCCATAT ATCTGAATGA AGCTGGAGAG AGTTGTAAGT CACAATTTCT GGAGGGCAGG CCTCATAGCA AAGGTCTTAT CAACAGAATC ATGTTTACGC CTTGGGATGA TCCTTGTTTC ATCACAGGTG GGAGTGACCA TGCAGTAGTG TTATGGCGGG ATCAATGTGA GAATAATGCG TGGAAGCCAA CGCTTCTGCA TAGGGACTTG CACTCATCGG CTGTGATGGG AGTTACTGGA ATGCGCCATA ACAATCTCGT CTTGTCATGT GGAGACGATA GGAGATTTGT TGGGTTTGAT GCCCGAGAAG AAAAAGTCAC GTTTAAACAT AGACTAGACA ACAGATGCAC TAATATACTG CCAAACCCAC GGGATGTTAA TCTTGTCATG GTTCACACAA GGCAGCTAGA CCGGCAACTG CGGTTGTATG ATGTTAGATT GCCTCAGACA GAACTATTTT CTTTTGGGTG GAAGCAAGAA AGCAGTGAAT CGCAGTCGGC TCTAATTAAT CAGTCTTGGT CTCCAGATGG TTTACACATC TCATCTGGTT CTGCAGACCC TGTGATCCAC ATATTTGATA TCCGCTACAA TGCACCGAGT CCATCTCTCT CGATGAAAGC TCATAAGAAA AGAGTGTTTA AAGCGGAATG GCACTCTTCT TATCCGCTGC TTGTCTCCAT CTCATCAGAT TTAGCAATAG GGATTCACAA GCTATGGTGA AAACTGTTAA AGCCATCACC TCCTGAATAT TTGAAGGCCA GTAACTTCTG AAACAGAACT TGTCTTGCAA GTTGTGGCAA GGTGTTGATT GGCAAGGAAG ACTCGACCAC AGCACGCACA CTGGATACAA AAACTGACTG TATTGGGAGT TGAATAGGTC AGTCCCAGGG TCTGAAGGCT CTGGTATGTT AATTTTGTTT GTTAACTTTG GGAAACCATT TTAGGGGGAT TACAACAT 
Length2328
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8039435.. 8043452
Download Sequence
A.thaliana
AGI-codeAT5G19920.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
30.2985 Ahg494453 RING/U-box superfamily protein
37.8682 Ahg486183 AGAMOUS-like 18
38.3406 Ahg919020 Pentatricopeptide repeat (PPR-like) superfamily protein
43.0116 Ahg943577
48.8672 Ahg473842 RING/U-box superfamily protein
51.5752 Ahg324904 myb domain protein 3r-5
59.0593 Ahg351609 Protein of Unknown Function (DUF239)
62.7853 Ahg490172 Ubiquitin-like superfamily protein
62.9444 Ahg928901 Galactose oxidase/kelch repeat superfamily protein
96.9948 Ahg480275
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression