| Annotation |
|---|
| Description | jgi|Araly1|488963|fgenesh2_kg.6__2097__AT5G20590.1 |
| Sequence |
TGACCAAAGT CGCATCTCAC GGTGAGATGA GTTCTGCGTA GCTCCAATGG TGGTGGCTTC ACAATGTCGA CTTCTTCTTC TTTCCCTCGC ACCATCGTCT CCTACACTGT GACAACTTCG CTCTTCGTCG TTATCTTCCT ATGCAGCGTC TTCTTCTTCA CGAGACGCTC TCTCGAACCT TCTCTCTCTC CTTACTACGC CGCCGACATC CCTCTCTCCG CCGTCGATCT ACCCCCTCCT ACGCCTCTCC TCCCTCAAAT CGAACCTCAC GATGGTAACG TCACCGTGGA AACGAAACAA AAGGAGGTAG GAGATTCGCG CCGCGGCGGC GATGACGTCG CGGTAGAGAC TGAGCTGAAA CTAAAAGATG TAGAAGATTC GCGCACGGAG AAAACTGAAG TGGAAGAAGA AGGCGGAGAA GGATCGCGCG GTGAATCTGT GGACCATGCG GTGGTCGAGA AGATGAGAGG CTGTGATTTG TACAGGGGAT CGTGGGTTAA GGACGATGAT GAGTATCCAT TGTATCAGCC TGGATTGTGT CCTTATGTGG ATGAAGCTTT TGATTGCCAG AGGAACGGGA GGCGTGATTC CGACTATCTT AATTGGAGAT GGAAGCCTGA CGGTTGTGAC CTTCCACGGT TTAATGCTAC AGACTTCTTG GTGAAGCTAC GAGGTAAAAG TTTGATGTTA GTTGGAGATT CAATGAATCG TAACCAGTTT GAATCAATGC TTTGCGTTCT TCGAGAAGGC TTATCTGATA AGAGTAGAAT GTACGAGGTT CATGGTCACA ATATAACAAA AGGGAGAGGC TACTTTGTAT TCAAGTTTGT AGATTACAAC TGCACAGTAG AGTTTGTACG GTCACATTTT CTTGTGAGGG AAGGAGTTAG AGCAAATGCT CAAGGAAATA CTAATCCCAC CCTTTCGATT GATCGCATTG ACAAGTCACA TGCTAAATGG AAGCGAGCTG ACATTCTTGT CTTTAACACT GGACATTGGT GGGTTCATGG AAAGACCGCC AGAGGGAAAA ACTACTACAA AGAAGGTGAC TACATCTATC CAAAATTTGA TGCTACTGAA GCATACAGAA GGTCGTTGAA GACTTGGGCA AAATGGATCG ATGAAAATGT GAATCCCAAA AAGCAGCTTA TATTTTATCG CGGATACTCC TCTGCCCATT TTCGGGGAGG TGAGTGGGAC TCTGGAGGGT CATGCAACGG AGAGGTAGAA CCGGTAAAGA AAGGTTCAAT CATTGATTCC TATCCTTTGA AAATGAAGAT AGTCGAGGAA GCCATCAAGG AGATGCAAGT TCATGTGATT CTTCTAAACG TGACAAAGCT GACTAATTTC CGCAAAGACG GGCATCCATC AATCTACGGT AAGACCAATA CGGATGGTAA AAAAGTGTCG ACAAGGCGAC AGGATTGCAG CCACTGGTGC CTGCCGGGAG TTCCCGATGT TTGGAACCAT CTTATCTACG CATCTTTGCT CCTTCAACCA CATTCCTAAA TTTGAGCACA TACATCAACA AAATTAGATA GTAAGAGAAG AGCAGAAACA AATGACCAAT CCAGTCTTCA CTGTTGTAGT AGTGATGTCA AATTTTGTGT AATTTATTG |
| Length | 1619 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 8303691.. 8306370 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G20590.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 5 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL5][TRICHOME BIREFRINGENCE-LIKE 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.65685 |
Ahg908648 | Protein of Unknown Function (DUF239) |
| 5.74456 |
Ahg491693 | Phospholipid/glycerol acyltransferase family protein |
| 7 |
Ahg487084 | Concanavalin A-like lectin protein kinase family protein |
| 10.3923 |
Ahg495848 | voltage dependent anion channel 4 |
| 14.9666 |
Ahg931973 | Secretory carrier membrane protein (SCAMP) family protein |
| 23.4947 |
Ahg496352 | Exostosin family protein |
| 28.1425 |
Ahg485899 | Sec1/munc18-like (SM) proteins superfamily |
| 28.7228 |
Ahg890140 | TBP-associated factor 11 |
| 37.6696 |
Ahg476820 | Protein of unknown function, DUF547 |
| 40.2492 |
Ahg473719 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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