Detail



ID : Ahg489024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489024|fgenesh2_kg.6__2158__AT5G21140.1
Sequence
AAACCCTAAC TTTTTCATAC GGTGAAATTA CGGAGGTCTG AGGATGGTAT CGCTAAGCTG GAAGCACCAC ACCCTAATTC AGGCTTTGAT TTCACGAGGT CCTCTCAAGG AGAAAGAATT TCACTCAATC TTCACCGGCG TCACCGGCAG AAACCCAGTA ACTGTTAAAA AGACATTTGA CAAGTACCTT CTTGAGATAA ACAAGGAACT CTCATATGTT CACTTTGAGT TGAAGGCTTG TAGAGATCAG TATGATGGTC AAGTTTGTTA TGGAGTCGTT AACAATGTCT CTGATGATCA ATCCAAACTC GGGACTAAAT ATTCTGTTCC GCAGATCGCT TTCTTTAAAG GCGTTATAGA AGCAATTGCA CAGGATGAAG CTGCTCAAGG TTGCATATCG AGCTTTGATG CTCTTAATAT CCGATTGGAG AATCAGATAT CAAGTGAAGC CAGCAGTAGT CAACAGCAAG TCCCTCCTGC TTTCAGGAAC TTTTCGATGT CGCAAAAGGA AAAAACTCTC GATGAACTTG TAAGGGACAA ATGGCTGTGT CGCACAAGAG AGGGCAACAT CGGACTTGGT ATAAGATCTC TTCTTGACCT GCGCAGTTGG TTCAGGAACA ATGATGTTCC TTCCTGTGAA GTCTGCAATG AAGCTGGAGT AAAGGCGGAT TTGTGTCCAA CCGAAGGTTG CACTGTCCGG ATACACAAGT ACTGCCTCAA AAAATTGTTA TCTCAAAGGG ATGATAAACG TTGCTCTGGT TGTGGGAAGC CATGGCCTTT GAGTAAAATT ACAAAAGCAG AAGCTGCTGA CGAAGCAATG AATGAGGAGG AGGAAAGCGA GACTCAAGCC GCAGCTCCAA AATCCAAAAG AAAAAGACAA CTTAGGAGTC ATGGAGAGTC AACTGAAAAT GGTTCTTCTC AAGCTTCTTT AGCTTCAACT AGTGGTGCTA AAGCGAGAAG AGTAACCCGT AGCGGGCACT CGATGTAAAA AAAACCATTT AAGAACTCTG GTTTTAGGGA TTAGATGTAT ATTTTGACGA CCGTTCTATG TCCAAACATC ACTGGAAGTT TGGTCTGATC TGATGTTTTC TCTTGTGGAT CATTGATGGA GTCATGGAGT GTTAAACTCC TCGGTTAAAG TCTACAACAT ATCTAAATTT TAAACCCGAG AATTTGATGC TAAATTGTGA TTTTGTCCTT TGTGCATTTA ACTAACTAAA ATTCAAATGA ACTTATAAAA GTAAA 
Length1245
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8545747.. 8548318
Download Sequence
A.thaliana
AGI-codeAT5G21140.1
Descriptionembryo defective 1379
TAIR curator summary
Alias[emb1379][embryo defective 1379]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg485117 Pentatricopeptide repeat (PPR) superfamily protein
60.2661 Ahg952033 Cyclase family protein
60.3738 Ahg940650 Ca-2+ dependent nuclease
67.7274 Ahg480096 transferases, transferring glycosyl groups
89.861 Ahg914427 phospholipase D alpha 2
97.1082 Ahg490249 BRCT domain-containing DNA repair protein
97.8162 Ahg354358 growth-regulating factor 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression