Detail



ID : Ahg489097

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489097|fgenesh2_kg.6__2231__AT5G22410.1
Sequence
GAATTCATAT AGATATTTCA ACCAAAAATG GCCGTGAAGA TCTCAACCAT ATCAGTATTG ATCCTTTCCC TTGCTCTACT TAGCTTCGGC CATTGTTGTT ATGGCCAGCT TCGAATCGGA TTCTACAGTA CAAAGTGCCC AAATGTCGAA AACATTGTAT CTAAAGTTGT TGGAGAGGCA TTCATCAAGG GTTCGTCCAT TGCACCCGCA ATGATCCGCC TTTATTTTCA CGATTGTTTT AGCAACGGAT GTGATGCATC GCTTCTTCTA GACGGTGCGA GCAGTGAGAA AAAGGCGTCG CCAAATCTAA GTGTACGAGG ATACGAATTG ATAGATGACA TTAAATCTGC GGTCGAGCAA GAATGCGATA GGGTCGTTTC TTGTGCTGAT ATCATAGCTC TTGCGACTAG AGATCTTGTT ACTCTTGCAA GCGGAGGGAA AACACGATAT GAGATACCAA CAGGACGATT AGACGGCAAA GTCTCTTTGG CTTTGCTCGT GGATTTACCG TCTCCTCGGA TGACCGTCTC GCAAACTGCT GCGAAATTTG CTGACAGGAA ACTAAGCCTT ACCGATATGG TTCTACTTCT TGGTGGACAT ACGATCGGAG TTGCACATTG TTCGTTCGTT ATGGACCGGC TATATAATTT CCAAAATACG CAACAACCTG ATCCATCCAT GGATCCTAAA TTGGTCCAAG AACTAAGACT CAAATGCCCT AAGGATTCGT CAATTGATGG CATCATTAAT CTGGATCAAA ATTTTACGAG TTCGAATACT ATGGATGTAT CTTTCTATAA ACAGATAAAT TTTCACCGCG GAATCCTTCA TATCGATCAA CAACTTGCCA TCGATGGGAT GACGAGTAAG ATGGTGACGG ATATAGCCAA TGGTAACGAC TTCTTGGCTA GGTTTGGTCA GGCAATGGTG AATTTGGGAT CGGTGAGACT TATTAGTAAG GCCAAAGACG GGGAGATAAG AAAATCATGT CGTTCTTGCA ACAATCCATC ATGCGTATAA ACAGTTGAAT AAAATTACGC GCTGTTTTTT TTGTTT 
Length1056
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8896818.. 8898257
Download Sequence
A.thaliana
AGI-codeAT5G22410.1
Descriptionroot hair specific 18
TAIR curator summary
Alias[RHS18][root hair specific 18]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg482264 atypical CYS HIS rich thioredoxin 3
13.4164 Ahg944758 Beta-1,3-N-Acetylglucosaminyltransferase family protein
14.4914 Ahg933689 Domain of unknown function (DUF313)
19.4422 Ahg895660
19.975 Ahg943831
22.2486 Ahg924873 ralf-like 8
26.2679 Ahg485397 homolog of RPW8 2
26.3629 Ahg919507 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
31.1288 Ahg891079 Transcriptional factor B3 family protein
31.305 Ahg916596
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression