Detail



ID : Ahg489152

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489152|fgenesh2_kg.6__2286__AT5G22980.1
Sequence
ATGGAGACCA AAACCAATTT TCTCCCTTTT CTCCTCATGA TTTTCATCTT TTCTCAGTTT TCGCTCTCAA CTTCTAAAAG GATCCTAAAC AATCCCTCTG TTTTCTCACC GTCTCCGAGT TCGTCGAGCA GTAATGCAGA GAAACTTATA AAATCATTCA ATCTAATGCC TAAGTATGAC GTTAATGTCA TCCCAAAAGG AAGCCCCGAT GCTCCAAGAC TCATTGAGAG ACAAATTGAT TTTCCAGCGA CGATCGGTTC CCAAAACGCT TCAAAAGGTC CATCTGTTCA AGAGTTTGGC CACTACGCTG GTTATTACAG CCTTCCTCAC TCCAAATCAG CCAAGATGTT CTACTTCTTT TTTGAATCAC GGAACAAAAA TACCGATCCG GTTGTGATAT GGTTAACCGG TGGACCGGGC TGCAGTAGCA GTGTCGCTAT GTTCTACGAG AACGGTCCCT TCAAGCTCTC AGAGGATCTG TCTCTCACTT GGAACGATTT TGGATGGGAC AAGGTATCCA ATCTGATCTA CGTGGATCAG CCAATTGGGA CCGGTTTCAG TTACACATCT GCCGAAAGCG ATCTCCGGCA TGACGAGGCT GGTGTCAGTA ATGACCTTTA TGATTTTTTA CAGGCTTTTT TTAAAGAGCA TCCAAAATTC GTAAAGAACG ATTTCTTTAT TACCGGTGAA TCTTACGCTG GTCACTACAT TCCGGCTTTG GCTTCACGTG TTCACAGTGG AAACAAAAAG AAAGAAGGAA TTCCAATCAA CCTTAAGGGT TTTGCGATTG GTAACGGTTT AACCAACCCC GAGATCCAAT ATGGTGCTTA TGGGGATTAT GCACTGCAAA TGAAGTTGAT TTCAGAGTCT GATCACGAGA GCATCAAGCA AGATTACGTT GAGTGTCAAA ATTTAACCAA AAAATGCAAT CTTGATGGTG GTTTAGCTTG TGATTCTGCT TTTGATGTTT GCAACAATAT CTTCAACATG ATAGCGGCAA AAAAGAGAGG CATAAATTAT TATGACATTA GGAAGAAATG TGTGGGAAGC TTGTGTTATG ACTTTTCGAA GATGGAAAAT TTCTTGAACA AAGAAAACGT ACGGAAAGCC TTAGGAGTTG GAGATATCGA ATTTGTGTCT TGTAGTAGCA CCGTTTATGA TGCAATGACA GAGGATTGGA TGATTAATCT TGAGGTCAAG ATTCCGACTC TTGTCAACGA TGGAATCAAT CTTCTAATTT ATGCGGGAGA ATATGATCTC ATTTGCAATT GGCTTGGAAA CTCGAGGTGG GTAGACCAAA TGAATTGGTC AGGCCAAAAG GGTTTTGGAT CAGCGAAAAA CGTACCATTC TTAGTAGATG GTAAAGAAGC CGGTTTACTG AAAAATTATG GTCCTCTCAC TTTTCTTAAG GTTCATGACG CTGGACACAT GGTTCCGATG GATCAACCTA AGGCTTCTCT TCAAATGCTT CAGAATTGGA TGCAAGGAAA GCTTAGCACT CCGAATGTTC GGGGATTTGG TCAATGA 
Length1527
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9211143.. 9213925
Download Sequence
A.thaliana
AGI-codeAT5G22980.1
Descriptionserine carboxypeptidase-like 47
TAIR curator summary
Alias[scpl47][serine carboxypeptidase-like 47]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg933635
5.2915 Ahg932514
6.63325 Ahg948597 Pectin lyase-like superfamily protein
9.38083 Ahg894848
19.8997 Ahg897722
21.0713 Ahg887694 Plant invertase/pectin methylesterase inhibitor superfamily protein
22.8473 Ahg470551 Protein of unknown function (DUF1264)
23.3666 Ahg493562 Late embryogenesis abundant protein (LEA) family protein
23.4521 Ahg937037 RGPR-related
24 Ahg923785
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression