Detail


ID : Ahg489265

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489265|fgenesh2_kg.6__2399__AT5G24090.1
Sequence
AACAAAAGTC ATCTTTTACT TCTTTTATAA AAAAAAGAAG TTAAGCAATA ACAAACAAAC ACATAACCAC AAAGATGACA AAAAACATGA CTAACATTAA TCTTCTCAAG CATGTTATAT ACCTTCTCTT CTTCATAAGC TGCTTTATTA CCAAACCCTC CGATGCATCC AGAGGTGGCA TAGCCATCTA TTGGGGCCAA AACGGCAACG AAGGTAATCT CTCGGCCACG TGTGCGACCG GCCGGTATGC TTACGTCAAC GTCGCCTTTC TTGTGAAATT CGGAAATGGT CAAACACCGG AGCTCAACCT TGCCGGCCAC TGCAACCCTG CGGCCAACAC TTGCACCCAT TTTGGCTCTC AGGTCAAAGA TTGTCAGTCT CGTGGCATCA AGGTTATGTT GTCTCTCGGC GGCGGGATCG GAAACTACTC GATTGGGTCC AAGGAGGACG CAAAAGTTGT CGCTGATTAC CTGTGGAACA ACTTCTTGGG AGGAAAATCA TCATCACGTC CCTTAGGTGA TGCTGTTCTT GATGGTATCG ATTTCAATAT CGAGCTTGGC TCTCCTCAAC ACTGGGATGA TCTCGCCAGG TCTCTCTCAA AGCTTAGCCA CAGAGGCAGA AAAGTATATT TAACAGGAGC TCCTCAATGT CCATTTCCAG ACAGATTAAT GGGAAATGCT CTCAACACTA GACGTTTTGA CTATGTTTGG ATCCAATTCT ACAACAATCC ACCGTGTTCA TACACTTCAG GAAATACTCA AAACCTCTTT GATTCGTGGA ACAAGTGGAC CACTTCAATC ACAGCCCAGA AAATCTTCTT GGGTCTTCCG GCAGCTCCCG AAGCTTCCGG AAGTGGCTAT ATCCCGCCAG ATGTACTGAC TTCACAGATA CTTCCGACTT TAAAGAAGTC TAGGAAGTAT GGAGGTGTAA TGCTTTGGTC TAAATTTTGG GATGATAAAA ATGGATACAG TTCATCTATA TTGGCTAGTG TGTGAAAAGA ATCGTAATGA CCATTCTATG TATATCAATT CTCTCGTGTT TGGTTTTTGA AGAATTGTTG TGTGTTTGTG
Length1070
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9841423.. 9843220
Download Sequence
A.thaliana
AGI-codeAT5G24090.1
Descriptionchitinase A
TAIR curator summaryChitinase A (class III) expressed exclusively under environmental stress conditions.
Alias[ATCHIA][CHIA][chitinase A]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg929930
9 Ahg472186 Arabidopsis defensin-like protein
10.4881 Ahg472780 FAD-binding Berberine family protein
14.8997 Ahg329886 Glycosyl hydrolase superfamily protein
16.0624 Ahg492497 cation/H+ exchanger 17
16.7332 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
17.088 Ahg946749 Uncharacterised protein family (UPF0497)
20.7123 Ahg481698 Exostosin family protein
23.4521 Ahg483400 NAC domain containing protein 42
24.1868 Ahg902471 beta glucosidase 27
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression