Detail


ID : Ahg489379

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489379|fgenesh2_kg.6__2513__AT5G25280.2
Sequence
GAACCAATCA CCCTTAGGGG ACACTTAAGA GAGAAACAAC CAAATCCTTC TAAAAAATTC TTCAATCTTC TTCTCGAAGC TTCTCCAATG GCGATTACAT CTTCTAGAAC CACCAGATCA AACGGATCTG CTCTCCGATC CAAATCACCG TCCGGCCGAT TCTGTGGCGT ATACTCATCA TCATCATCTC CGTCGTCGTC AGGTTTCGCT TCTTCCACAA GCTCAAGTTT CTCGTCACCG TCTACAGCGT TTTTCAGCAG CCACAATCAG AACAACCACC ACCATAACCA CCAACACAGA TCTGCATCTC CGACGCGTGT GAATCTATTC ACATCAGCTC CGATGACGCA ATCGTTTCGT TACTCGATTG ATAACAGATC TATATCACCG AATCGATCCA TCGCTGTTTC TTCCAACAAA CCTAGTAATC ATCATAAGAT TCCGGATTCG AGAAGGAGAT GTATGTGTTC TCCGACGACG CATCCTGGTT CTTTCCGGTG TAGTCTACAC AAGAACGTCG CGAATCCACA CGGTCAAGGT ACAGGGACGT ATCCGACGAA TAGTTTGAAT ATGCGTAGAT CTGCGATGAC GAATTCGCTT GTGAGAATCG GTGGTGTTGA AGGTGAATGG GTGAGAAGAG CTTTGACTAC TTTGATTCGA CCATCGTCAC ATCAACTCAA GAGAAGATCT GCGTATGAAC CTCGTCGTAG CAGACTCGCA TCTATGTCGA AAGCAGAAGA TCTTTGAATC TTTCAGGTTT GTTCTTGTTT TTGAAATACT CAGATCTGCC ATGTCGGAGC TGAGTCATAC CGGACCGAGT GAAATTCGGA GTTGAGTTAA ACCGGACCGA GTTATGTAAA CGGTGACCAA GACGACACCG TTTTTGTTTT GTTGGGTGGG AGATGAGATG ATGATGATGA TGATGCATTG TACATACACA TATTTGCTTA TTGAAGCAGA GAAAAAAATT TCGCAAGTCG AAAGTATCTA GAAATCTAAA ATTGGAAAAT AGTAGTGACG AATTGGGTAA TTAAAATCTG GAAAAGGACT TAGTAGTAAA TTCTCCATCG TTCGTTGCCT TCACCGTTTG TTTGTTCCGT CAAGTCAACG TTCTCCATTC TCCGTTGATC CGTTCTGTTT GCCGTTAACC GTCGTCGTGT GTTATGTGTG TTGCGTTAAT ATTCCCCAGG TATGTGTTGT TCGTCGTGTC AGGTTTCGTA CAATGAGGAG AAGAAGATTA CTTAGTTTAA CCGTTACGAT CAACTTTGGA ATATTTTGGG GACTTTTGTG GACTATGGCA AAAAAAGAGA AGAATCAAAT ATTTGAAAGA TTTTGATTCG TGAAAAAATT AATTTTGGAG CTAAAGAATG TGAAAGATTC TAAGGAATCA GATTTTTCCT AAACATCTCA AGAATTTGTG AATCACAGAT TGAGTGAGAT TCCTGAAACG GTTGAGGTTA AAGTGAATGA TTCAATGGAA TCTTATTTTT ACCTTAAACA TCTCAAGGAG GATAGGGTAA ATGATGAAAT TTTTTAGGGC AAGTTTGGAA AGTAAAAGAT TCTTGAGGGG TATAGTTGAG AAAAGGACAG CTGGCGGATG AATGGAAAAC AGCCTAACAT GAAATTAAAT TAAAGGAACA AATCGTCCTT ATCTCGGGAT TAAAAAGTTG GATTATACTA TTTTACGCAT AGGTAGATTT TATAGATCCC ATTGATTAAT TAGTTAATAA AACGGAGGAA GTATTAATTA GGTTTGATTT AGTTGACTGA TTATATCGTA ATCTCTAACT ACTAGGTTCT AAGTAACATT TTCTTCACGG TAGATGATGG ATTCTTTTTT AATAAAAAAA AAATTGAGGT TTTATTTTTC TTATAAACTT TCTTTACTCG TTTAGTATAC TGTACTTAAC TATTTTTTAT ATATATGTTC ATTGTTTTTG GAAGTTA
Length1947
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10633280.. 10636420
Download Sequence
A.thaliana
AGI-codeAT5G25280.1
Descriptionserine-rich protein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg479130 translationally controlled tumor protein
12.2066 Ahg488679
13.6382 Ahg896073 MAP kinase 17
13.7477 Ahg472192 Wound-responsive family protein
15.2971 Ahg482229 TRAF-like family protein
16 Ahg473046 dormancy-associated protein-like 1
18.4932 Ahg938640 calmodulin 3
18.9737 Ahg481806 CAX interacting protein 4
19.7484 Ahg938734 seed imbibition 2
21.4243 Ahg473866 Granulin repeat cysteine protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression