| Annotation |
|---|
| Description | jgi|Araly1|489410|fgenesh2_kg.6__2544__AT5G25520.2 |
| Sequence |
TTTTAGGGTT TCCTCTTCCC TTCGCACATA TCTTGCTCCG ATTGATTTTC CAGTGAACTT GTATTTTATT TTTGTTTTTC TCAGAGCTGT TGAAGTGAAT GTTTGGATAT CGCTGTTGTG GTTTAGTATC ATGTCCAGTA ATATGGGAAC AGAGCATATT GATCTGGAGA CAGATACTTT TGGAGAAACG AATCTGATAG AGATAGTAGG ATCAAATGAT CAGCATATCT CAGTTTCAGA CATGGAACAA GAGCCTTTGG AAACATCTGT CTCTGGTCCT TTGGCATTCC GATTTGAACC TGAGGATGTC TCTTTTCAAT CCTCTATGTT GGTTGATACC CAGTCTTTGA TGCCTCAGTT GCAACTTCCT GTTGCACATT CGTATTCTGG AGAGAGTTCT GTATCTGCAT GTAGTATCCT TCCAGGGGCA GGGAAGCGTA ATTCACCACC AGAGTCTCAG TCGACTCTCG GTGGTTCTGC TGCTTCCGAG AAGTTAGATG CACCAAATAG GCGAGTAGAG CCAGTGCATC ACAGACCATG GCTAGAACAA TTTTATTCAG AAAGTATTGA GCGGGGTCAT ATGCCGCCAC CTGCTACTCT TTCTCCCAAG ACGGAACATC CACCAACGTC TGCTAAGAGA TCAAGGCAAA TGGAACCTGC TTCCCAAAAA TCTGGGAAGC AAGTGATGAA CAAGAAACAA TCAGGCCTGT CACAAGGGTC GGTGAAAACA CAGAATGATG GTAACGAGTC TTTAAGATCT AAAATGAAGG AATCATTAGC AGCTGCCTTG GCTTTGGTTC ACGAGCATGA GGAATCTCCG AAAGAGAAAA AGAATTCAGA AACTGAAGAA GCAAGTGTTC CAGTAGCTGA AAGTAATGAG CCTGCCTCAG CCGATGGTAC TAGTGTTACA GTAGCTGAAG ACATCACACC GGCATTGTCA ACAAGGGATG ATAGTTTTGG GCAGAAGAAT GGCAATGGAA GAATTTTGTC GCAAGAGAGT TCCAATGACA CAAAGATGAA TTATGTTAAT CAATCTGATG TACAGAAAAC TCAATTTGAC GAGGTTTTCC CCTGTGATGA TGTTCGTTTT AGTGATAGTA TTTTTTCTGG GGATGAACTT TTACAGGGTA ATGGCCTCTC ATGGGTTTTG GAACCTGTTT CAGATTTTGG GGAGAATGAA CCTCAAAAGT CGTTTGAGGA TCCAGAGCTC TTGGCATCTA AAATTGAGTT GGAACTTTTT AAGCTATTTG GAGGTGTGAA CAAGAAGTAC AAAGAGAAGG GAAGGTCTCT CTTATTCAAT TTGAAGGATA AGAACAATCC TGAGCTAAGA GAAAGTGTCA TGTCCGGAAA GATATCTCCA GAGAGATTGT GTAATATGAC AGCTGAGGAA CTTGCTTCTA AGGAGCTTTC TCAGTGGCGA CAAGCAAAAG CAGAAGAGAT GGCGGAGATG GTTGTCCTGC GGGATGCAGA CATTGATGTC AGAAATCTGG TGAGGAAAAC GCATAAAGGT GAGTTCCAGG TAGAAATTGA TCCTGTTGAT AGTGGGACAG TGGATGTGTC TGCTGAGATT ACCTCACATA GTAAACCTCG AGCCAAAGCA AAATCCGCAA AATCATCTAC CAAATCCACT TTAAAGAAAA ATGGCTCGAA TGATAAGAAC ATAAAACTCA ACCAGGGAAC ATCATCTGCT ATGACTCTGC CCCCAACAGA GGAGATTGAT CCAATGCATG GTCTGTCAAT GGATGATGAG ATGAAGGATG TGGGTTTTCT TCCTCCAATT GTATCGCTTG ATGAGTTCAT GGAATCCCTG AACTCAGAAC CTCCATTTGG CAGTCCACAT GAGCATCCTC CTGTAAAGGA AGAGCCTGCA TCTGAGAAGA GTGACTCTAA AGATGGGTCA CATTCAAAAT CACCTTCAAG ATCTCCAAAA CAGTCTCCAA AGGAACCCAG TGAGAGCGTC TCTTCTAAAA CAGAACTCAA AATGACTAAT GTAACTTCCC CAAAACTGGA TGCTGGTGTC AAACTCGACA CTGATGTCTC TAAACCTGAA GAAATACTTT TGGTTGATAA CATTAAAGAG GACCGAATAT GGGATGGTAT ACTGCAGCTT AGTGCCGCTT CCGTTGTCTC AGTCACTGGA ATTTTCAAGA GGCAAAAATG GGTTATTAGT ACCAAAGATA TGCATGAAGC TAAGTTTAGA CTTAATAGGA AACAGCTCAC AAAAGAGTAC ATTGGTGAGA AAGCAAAGAC AGGCGAGTGG CCAACAATGG TGGAGGTAAA GGGTAGAGTG AGACTCAGCG CGTTTGGGAA GTTTGTAAAA GAGCTTCCGT TGTCTCGAAG CCGTGTCTTA ATGGTAATGA ACGTGGTTTG CAAGGATGGT ATCTCTCAGA GCCAACGTGA TAGTCTTTTT GAGGTTACTA AGTCGTACGT AGCTGACCAA AGAGTTGGTT ATGCAGAGCC AACGTCAGGC GTTGAGCTTT ACCTCTGTCC ACCACGCGGT GAAATACTTG AGTTGTTGAG CAAAATCATC TCAAAGGACC ATCTTGATGA GGTCAAGTGT TCAGAGGTTA TCGGGTTGAT CGGTGTTGTT GTGTGGAGGC GTGCAGTTGT CGCGTCTCCT GGCTCACGAC ATAAGCCTGG ATTCAAACGT CAGCATTCTT CTTCTGGTGC TAAGAAGTCT GTGTTGGCTC CAGAAAACAA AAAGTCCAGT GGTGTGAATG TTACGAATCC GCCGCCTGTT GTAAATGTTG CATCCATGAG GAATCATGGT TTGGTTGGTT TTGATAATGA TGATGAAGAC GTGCCACCTG GATTTGGTCC CGTAGCTGCG AAAGATGACG ATGATTTGCC AGAATTTAAC TTCAATTCCT CCAGTGGACC AGTTACTTCT TCTCCTCAAC CACCGCCTCA GTCTCGGTCT ATGGAGCAAG TAAGGGAGCT CATTCTTAAA TATGGAAATT CAGCAGGTAG TGGTAGTAAA CGACCATGGG ATGGTCATGA GGATGATGAC GACGATGACA TTCCTGAATG GCAACCGCAA GTCACAGGCC ACCAAGTTCA ACTGCCACCA CCACCTCCTG ACTTGAGTCC TCAATTTCAT AGCAGAACCA TGGCTAGACC ACCAGCACAA CAACAACCTG TTGCGGGACC ATCGAGTGGA TGGAAGGCCT ATCAAAACAC ACCTAGACAA CAACAGTACA GTGCACGTAG AAACAGAGGA TTTTGATCTT TGTGAATGCG TTTGTGTAAT TAAAGTTTGT TAGGTGTATT GACTTCTCTA TCATCAGCTT TTTTTGTTTT GTAGTGTTTC AATAGAATTG TAAACCTTTG AATAATGGAG TCTTTTAAGC ATAAAAGTTT GAATTCAACA |
| Length | 3370 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 10793371.. 10797940 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G25520.2 |
| Description | SPOC domain / Transcription elongation factor S-II protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg495275 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 13.8564 |
Ahg475482 | Arabidopsis thaliana protein of unknown function (DUF794) |
| 14.8324 |
Ahg920751 | HCP-like superfamily protein |
| 15.7162 |
Ahg484003 | reduced epidermal fluorescence 4 |
| 18.3303 |
Ahg496645 | beta-ureidopropionase |
| 20.1246 |
Ahg484223 | ATP/GTP-binding protein family |
| 22.6936 |
Ahg496813 | 2-oxoglutarate dehydrogenase, E1 component |
| 24.0624 |
Ahg910955 | F-box and associated interaction domains-containing protein |
| 24.6779 |
Ahg485391 | Protein of unknown function (DUF1162) |
| 30.7896 |
Ahg319845 | nucleic acid binding;zinc ion binding;DNA binding |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|