Detail



ID : Ahg489453

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489453|fgenesh2_kg.6__2587__AT5G26070.1
Sequence
ATGGTGTCTC TAGGACTTTC CATCACCCTA GTTTTTCTCT TGGCAATCAT ATTCACAGTT GCTGAAGCTA AAAACAACAG AAAACTCCTA CCAAGTCCCA CTAACTACCA ACCACTATAT TATCCTTCTC CATCGCCTTA TCGGCCTCCA GTTACTCTTT CTCCTCCTCC TCCACCTCCG GCTTATTCTC GTCCGGTTGC TCTTCCTCCC ACACTTCCAA TTCCTCATCC TTCTCCTCAT GCTGAAAGAT TCTACTACAG GCAATCTCCT CCACCTCCCT CCGGAAAACC TTGGTGGTGG TTGTTGTAG 
Length309
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11150577.. 11150885
Download Sequence
A.thaliana
AGI-codeAT5G26070.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summaryEncodes a protein with 23.5% proline residues and proline-rich extensin domains, INTERPRO:IPR002965; similar to root nodule extensin (Pisum sativum) gi:15021750/gb:AAK77902; Common family members: At5g19800, At5g57070, At1g72790 (Arabidopsis thaliana)
Alias
Gene coexpression
MR
MR Locus Description
7.48331 Ahg890836 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
11.6189 Ahg938977 jacalin lectin family protein
12.8452 Ahg915787
39.1663 Ahg907078
39.1663 Ahg912096
60.6218 Ahg484723 Glutamine amidotransferase type 1 family protein
69.5701 Ahg486769 Glycosyl hydrolase family protein
71.0563 Ahg929489
72.111 Ahg943379
91.586 Ahg920704 beta-tonoplast intrinsic protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression