Detail


ID : Ahg489832

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489832|fgenesh2_kg.6__2966__AT4G09800.1
Sequence
GAAAAACCCT AGCAGACCTC TTTTGTGTTC TTCACTCTCC AGAGATCGTT TATTGCTTGA AGACGGCTTC TTCTTCTTCT AACAAATCTC ATCTCTGCAA ATCAAAATGT CTCTGGTTGC AAATGAGGAG TTTCAGCACA TTCTTCGTGT GTTGAACACA AATGTTGATG GTAAGCAGAA GATTATGTTT GCCCTTACCT CTATCAAAGG TATTGGGAGG CGATTGGCTA ACATTGTCTG CAAGAAGGCT GATGTCGACA TGAACAAAAG GGCTGGTGAG TTATCTGCTG CTGAGATTGA CAACCTCATG ACAATCGTTG CAAACCCACG TCAGTTCAAG ATCCCAGACT GGTTCTTGAA CAGGCAGAAG GATTACAAAG ATGGCAAGTA TTCTCAAGTT GTCTCCAATG CACTGGACAT GAAGCTGAGA GATGATCTTG AACGTCTCAA GAAGATCAGA AACCATCGTG GTCTGAGGCA TTACTGGGGT CTCCGTGTGA GAGGACAACA CACCAAGACT ACTGGTCGCA GAGGAAAGAC TGTTGGTGTG TCAAAGAAGC GTTAAAGCAA GAGCCAATGT TGCTACTTAC TGCTGTATTG GATACTTCAT AAGGACCTGT TTTTATTTCG TACTAGGACC TTTTTGTGTG ACGCTTTTCG GGCTTTTTGT GATCACATTC CTCTGTTTTT CAT
Length693
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18711677.. 18713188
Download Sequence
A.thaliana
AGI-codeAT4G09800.1
DescriptionS18 ribosomal protein
TAIR curator summaryencodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex
Alias[RPS18C][S18 ribosomal protein]
Gene coexpression
MR
MR Locus Description
13.2665 Ahg941581 Ribosomal protein S8e family protein
14.1421 Ahg485677 Ribosomal protein L24e family protein
20.0499 Ahg470235 Ribosomal protein L19e family protein
21.2132 Ahg489475 TCP-1/cpn60 chaperonin family protein
22.8035 Ahg477850 ribosomal protein L18
24.5967 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
25.0998 Ahg937821 Translation protein SH3-like family protein
31.8591 Ahg947841 ribosomal protein L5 B
32.4037 Ahg482583 translocase inner membrane subunit 44-2
36.5513 Ahg477436 Ribosomal protein S19e family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression