Detail



ID : Ahg489841

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489841|fgenesh2_kg.6__2975__AT4G09960.3
Sequence
ATCAAGTTCC CATCTTTGTA CACATCTCTT CATTCAAAAA CTCTACATTT ATATCTCTCT ATATATGCAG ATTCCAAGCT TATAATAATT CTTGTCAGCA TGGGTTTTTT CTTTGCTTGT CTCTTCACAA AACTTAATTT TCACAATTAT GAAATATTTT CCCTTTTTAT GATCTCTTCC GTCGTTTGAT GCTCTTTCCC CATGAAAGAA AGAGAGACAA AGAAAGATCA CCAGATTAAT GTTGTTTGAT GTTTTTAAAA TGAAGGATGG GAAGAGGAAA GATAGAAATA AAGAGGATAG AGAACTCAAC AAATCGACAA GTGACGTTTT GCAAAAGAAG AAATGGACTT CTGAAGAAAG CCTATGAGCT TTCGGTCCTT TGCGATGCAG AAGTTGCGCT CATTGTCTTC TCCACTCGTG GCCGTCTCTA TGAGTACGCC AATAACAACA TAAGATCAAC CATTGAGAGA TACAAGAAAG CTTGTTCTGA TAGCACCAAC ACCAGCACTG TCCAAGAAAT CAATGCCGCG TACTATCAAC AAGAATCTGC AAAGCTGAGA CAACAGATCC AAACAATTCA AAACTCCAAC AGGAATCTGA TGGGAGAATC TTTGAGTTCC CTAAGTGTCA AGGAACTAAA ACAAGTTGAG AATCGCCTTG AGAAAGCTAT CTCCAGGATC AGGTCCAAGA AGCATGAGTT GCTTCTAGTT GAAATCGAAA ACGCGCAGAA AAGGGAGATT GAGCTTGATA ATGAGAATAT CTATCTACGA ACTAAGGTAG CAGAAGTGGA GAGGTATCAA CAACACCATC ATCAAATGGT TAGTGGTTCA GAGATCACCG CCATCGAAGC TTTAGCCTCA CGCAATTACT TTGCTCATAG TATTATGACT GCTGGTTCTG GTTCTGGTAA TGGAGGTTCT TACTCTGACC CCGACAAGAA AATCCTTCAT CTCGGTTAAT CTCGTGGGTG AAAATCGAGC TGCAATAACG CTCTGCATCT GGGGATTCTC TACTCAGATT TATCTCTACA TAAAATATGT TTTGGTTTAT GATAATAATT CAAAGTACAA TGAAGGTATT GATCCTTCAA GACTCATTGG AAATTGTGTT GTGTAATGAT GAAGACATAC TCT 
Length1133
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18828946.. 18833085
Download Sequence
A.thaliana
AGI-codeAT4G09960.3
DescriptionK-box region and MADS-box transcription factor family protein
TAIR curator summarya MADS box transcription factor expressed in the carpel and ovules
Alias[AGL11][STK][AGAMOUS-like 11][SEEDSTICK]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg895660
27.9285 Ahg890457 F-box family protein with a domain of unknown function (DUF295)
28.9137 Ahg939831
37.7359 Ahg493853 Exostosin family protein
47.3709 Ahg343146 Protein of unknown function (DUF1685)
53.3854 Ahg324894 GCK domain-containing protein
59.4643 Ahg490205 Cystatin/monellin superfamily protein
61.1882 Ahg921331 F-box and associated interaction domains-containing protein
62.6418 Ahg899187
62.7853 Ahg491295 Glycosyl hydrolase family 10 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression