Detail



ID : Ahg489874

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489874|fgenesh2_kg.6__3008__AT4G10310.1
Sequence
GCTTAAACCG ACTAGAGAAC TAAAATGGAC AGAGTTGCGG CAAAAATAGC TAAAATCCGT TCGCAGCTTA TGAAATCTAG TTCACTATTC TTACTCTATT TCATCTACTT CTTGCTCTTC TCCTTTTTAG GGTTCTTGGC TCTAAAGATC ACAAAGCCAA GAACCACTTC ACGTCCTCAT GACTTGGACC TTTTCTTCAC TTCTGTCTCT GCCATCACTG TCTCTTCCAT GTCTACCGTC GACATGGAAG TCTTCTCCAA CACCCAACTT ATCTTCCTCA CTATCCTCAT GTTCCTTGCC GGCGAAATCT TCACCTCCTT TCTCAACCTC TACTTTCAAC ATTTCACCAA CTTCGTCTTC CCTCACAACA AGATTAGACA TCTTGTGGGA TCTTTTAACT CGGACCGTTG TGACCTCGAG ACTGTTACTG ATCATCGCGA GGGTCTTAGC AAGATCGAAG AAAGGGCATC TAAGTGTTTG TACTCGGTGG TTCTTAGTTA CCATCTTGTA TCAAACCTAG TTGGCTCTGT GTTGCTTCTT GTGTACGTAA ACTTTGTTAA AACGGCGAGA GATGTTCTTA GCTCAAAAGA TATCTCACCT CTCACTTTCT CCGTCTTCAC AACTGTTTCC ACGTTTGCAA ACTGCGGATT CGTCCCCACG AATGAGAATA TGATCATCTT TCGCAAGAAC TCTGGACTCA TCTGGCTCTT AATCCCTCAA GTACTGATGG GAAACACTTT GTTCCCTTGC TTCTTGGCTT TGCTCATATG GGGACTTTAT AAGATCACAA AGCGTGACGA GTTTGGTTAC ATTCTAAAGA ACCAAAAAAA GATGGGATAC TCTCATCTAC TCTCCGTACG TCTATGTGTT CTTCTTGGAG TAACGGTGCT AGGGTTTCTA ATAATACAGC TTCTTTTCTT CTGTGCCTTT GAGTGGACCT CTGAGTCTCT AGAAGGAATG AGTTCGTACG AGAAGTTGGT TGGGTCGTTG TTTCAAGTGG TGAATTCGCG ACATACCGGA GAAACTATTG TTGACCTCTC TACACTTTCC CCAGCCATCT TGGTACTCTT TATTCTTATG ATGTATCTTC CTTCATACAC ATTATTTATG CCGTTGACGG AACAAAAGAC GATAGAGAAA GAAGGAGATG ATGATTCCGG AAATGGAAAG AAAGTGACAA AGAGTGGACT CTTCGTGTCA CAACTTTCCT TTTTGACGAT ATGCATCTTT CTCATTTCGA TCACCGAAAG GCAAAAACTA CGACGCGATC CACTCAATTT CAATGTCCTT AACATCACTC TCGAAGTTAT CAGTGCATAT GGAAACGTGG GTTTCACTAC CGGGTACAGC TGTGAACGGC GTCTGGACAT CAGCGACGGT AGCTGCAAAG ACGCGGGTTA TGGATTTGCA GGACGATGGA GTCCTGTCGG AAAATTCGTA CTAATAATAG TAATGTTTTA TGGGAGGTTT AAGCAGTTCA CAGCCAAATC TGGCCGAGCA TGGATACTTT ATCCCTCCTC TTCCTAACAT ATCATATATA AATGTTATAT AAAAATTAGT CTCGTGTGTC ACTTTAGTAT TCCTTTTCTG TGTGATGTAC AATAAGTTTG TATGTAGGTT TCATCATCGT TAATAATATT AACGATTCGT TAATATTATT AAATGTATGA AAATATAATT TAAGGA 
Length1686
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19111935.. 19114904
Download Sequence
A.thaliana
AGI-codeAT4G10310.1
Descriptionhigh-affinity K+ transporter 1
TAIR curator summaryencodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.
Alias[ATHKT1][HKT1][HKT1;1][high-affinity K+ transporter 1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg934138
15.0997 Ahg891079 Transcriptional factor B3 family protein
26.1151 Ahg926320 Protein of unknown function (DUF1163)
28.5132 Ahg900051
37.1483 Ahg946652
39 Ahg905266 ankyrin repeat family protein
39.2301 Ahg320410 low-molecular-weight cysteine-rich 23
40.0375 Ahg925381 SCR-like 2
46.1302 Ahg892780 VQ motif-containing protein
49.4773 Ahg925331
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression