Detail



ID : Ahg489947

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489947|fgenesh2_kg.6__3081__AT4G11080.1
Sequence
ATGGCGACAG TTTCCTCAGA TCCTGCTCCG GCGAAGAAAT CGAGAAACAG TAGAAAAGCG TTGAAGGAAA AGAATGAGAT CGTCGAGAGT CATCACCATT GTTGTCACCA ATCTCAACCA AGGGGAAAGA AACGAAATCC AATGTTGGAG AAGATGAAGA TCGAGAAGGA TAAAACTGAG GATTTGCTGA AGGAGAAGGA CGAGATCCTG AAGAAGAAGG AAGAAGAACT CGAGACGAAG GACGTGGAAC AGGAGAAACT TAAGACGGAG TTGAAAAAAC TGCAGAAGAT GAAAGAATTC AAGCCTAACA TGAGTTTTGC GTTTACTCAA TCTTTGGCAC AAACTGAAGA AGATAAGAAG GGGAAGAAGA AGAAGAAGGA TTGTGTTGAA ACAAAGAGAC CATCAACACC ATATATTTTG TGGTGTAAGG ATAATTGGAA CGAAGTGAAG AAGCAGAATC CTGAAGCTGA TTTCAAGGAG ACTTCGAATA TTCTTGGTGC TAAGTGGAGG ACTCTGAGTG TAGAAGAGAA GAAGTTTTAT GAGGAGAAGT ATCAGGTTGA TAAGGAAGCT TATCTTCAGG TTATTACAAA GGAGAAGCGC GAAAGGGAAG CTATGAAGCT TCTTGATGAT GAACAGAAGC AGAAAACTGC TATGGAATTG CTTGATCAGT ATCTTCACTT TGTTCAGGAA GCTGAACAAG ACAACAAGAA AAAGGCCAAG AAGATAAAGG ATCCCCTGAA GCCTAAACAT CCAATATCTG CTTACCTGAT CTATGCAAAC GAGAGGAGAG CTGCTTTAAA AGGAGAAAAC AAAAGCGTTA TTGAGGTCGC AAAGATGACT GGAGAAGAGT GGAAGAATTT ATCGGAAGAA CAAAAGGCTC CTTATGATCA GATGGCAAAG AAGAACAAGG AGATATACCT GCAAGAAATG GAAGGATATA AAATAACAAA GGAAGAAGAA ACCATGAGCC AGAAGAAAGA AGAAGAAGAA CTCATGAAAC TCCATAAACA AGAAGCTCTT CAACTTCTCA AGAAGAAGGA AAAAACCGAC AATATCATAA AGAAGACGAA AGAGACGACC AAGAACAAGA AGAAGAACGA GAATGTTGAT CCTAACAAAC CCAAAAAGCC TGCTTCTTCA TACTTTCTCT TCTGCAAAGA AGCAAGAAAG AGTGTGTTAG AAGAACATCC TGGGATCAAC AACTCAACTG TTACCGCCCA CATTTCATTG AAATGGAAGG AACTTGGTGA AGAAGAGAAA CAAGTTTACA ATGGCAAAGC TGCTGAGTTA ATGGAAGCTT ATAAGAGAGA AGTGGAAGAG TACAATAAGA CCAAGACGTC GTCGTAGAGA AAGAAAAATG AGA 
Length1363
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19572329.. 19574686
Download Sequence
A.thaliana
AGI-codeAT4G11080.1
DescriptionHMG (high mobility group) box protein
TAIR curator summary
Alias[3xHMG-box1][3xHigh Mobility Group-box1]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg481360 early nodulin-like protein 14
7.34847 Ahg470918 syntaxin of plants 111
7.74597 Ahg477690 Li-tolerant lipase 1
7.87401 Ahg920750 Pathogenesis-related thaumatin superfamily protein
10.0995 Ahg358300 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12.49 Ahg481792 Pathogenesis-related thaumatin superfamily protein
14.2478 Ahg935507 ataurora3
14.6969 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
16.7332 Ahg471757 CYCLIN A2;3
17.0294 Ahg945123 Putative membrane lipoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression