Detail



ID : Ahg489953

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489953|fgenesh2_kg.6__3087__AT4G11150.1
Sequence
AGACAACTTC AAATTAGTCA TCACCACGTC GCGAAAATCC GATCTACGTC TCTCTCTCTC TCTTCTCCAA TCTCTCTGCG CCACAGAATT ACGAAAACCT CCGATCGTTA ACGGCGACCG GTAAAAATGA ACGACGGAGA TGTATCGAGG CAGATCCAGC AGATGGTGAG ATTTATCCGC CAAGAAGCAG AAGAGAAAGC AAACGAGATC TCGGTTTCCG CTGAAGAAGA ATTCAACATT GAGAAACTTC AGCTTGTTGA GGCGGAGAAG AAGAAGATCA GGCAAGATTA TGAGAAGAAG GAGAAGCAAG CTGATGTTCG CAAGAAGATT GATTACTCTA TGCAGCTAAA TGCTTCAAGG ATCAAAGTTC TTCAAGCGCA GGACGATATT GTCAATGCCA TGAAAGACCA AGCTGCTAAG GATCTTCTGA ATGTGAGTCG CGATGAGTAT GCCTACAAAC AGCTTCTCAA GGATCTGATT GTTCAGTGTT TGCTTCGGTT GAAAGAACCT TCTGTGTTGT TGCGTTGTCG TGAAGAGGAC TTGGGTTTAG TTGAAGCTGT GCTTGATGAT GCAAAGGAGG AATATGCTGG CAAAGCAAAG GTTCATGCCC CAGAGGTCGC TGTTGACACA AAAATATTCC TTCCTCCTCC TCCTAAATCT AATGATCCTC ATGGTCTCCA CTGCTCTGGA GGTGTTGTGT TAGCTTCTCG TGATGGGAAA ATCGTGTGCG AGAACACACT TGATGCGCGT CTTGATGTGG CATTCCGTAT GAAACTCCCA GTGATCCGTA AGTCGTTGTT CGGCCAAGTT ACTGCCTGAT GAAAGAAAGG GAAAGAGAGA GATGATTCAA ACCGGTTTGT GTTTGGTTAT TTACCTATTT TGGGAGAGAA ATCTCTTTTG TTGTGATTCT TTGTATTTTG CAAAATCTTA CTTTGGTGCC AAACCCATCG AACGCTTCTT TTTGTGTGTT ATCATGGCTA TACAAATAAA TAAAATGAAA GACATCTTT 
Length1009
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19648532.. 19650316
Download Sequence
A.thaliana
AGI-codeAT4G11150.1
Descriptionvacuolar ATP synthase subunit E1
TAIR curator summaryEncodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.
Alias[emb2448][TUF][TUFF][VHA-E1][embryo defective 2448][vacuolar ATP synthase subunit E1]
Gene coexpression
MR
MR Locus Description
16.3401 Ahg944059 cytochrome c oxidase-related
22.3607 Ahg918907 nuclear encoded CLP protease 5
26.3629 Ahg483266 Ribosomal protein S5 family protein
40.1248 Ahg494606 GroES-like zinc-binding dehydrogenase family protein
46.2169 Ahg477055 vacuolar ATP synthase subunit A
65.8027 Ahg496212 PDI-like 1-4
65.8407 Ahg336036
65.8483 Ahg488058 Rho GTPase activation protein (RhoGAP) with PH domain
74.8331 Ahg478543 ribosomal protein 5A
75.6703 Ahg491774 Pyridoxal-5'-phosphate-dependent enzyme family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression