Detail


ID : Ahg489994

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489994|fgenesh2_kg.6__3128__AT4G11780.1
Sequence
ATGGCGTCGG CGATCAGTTC CTCTGACCAT CGTCTATCGA CAAGCAAGAG ACGTTTGAAG CCATTGATGC TAAGAGATTA CTTACTCGAT GATCTCAGTT CTTGTTCATC CAACGGCTTC AAATCATTCC CACGTCGTCA AACTCCCTCT TCATCTTCCA CCGTTCGTCG TCTTCTTGAC GCCGAGATCA AACGGTCAGG ATTGATCCAT CATCATCATC ATCACAACAA ACAACAACGT CTCACCAGAA GATCAAGCCG TACAACTTGT GGAACGGCGA TAAGTCACGC CGTTCATAAA GCTTCGACGG CGTTTCTTAA ACTTTTGCCG TTCCCTTCTT CCGCCGTTAA AAAACAAGGC GTTTTCTCTA GAAGCTTCTC TAAACGGCTT TTAAGTAGAA GCTTCTGGAG AAAACCCGTC GTTAGTCTAT CTCGCCGTGA TGTAACCGGA GATGGAGACG GAGAGATCCA ATGGTGGAGA TCCGTCGCAT ACGAAGAGAG CTTAGATCAA CGGTCGGATC TAATCTCTCA ACTCTCCACC ACCGACGACA AAATAACATT TTCAATCTCA GCCGCTGCGA TCACCACCGT GGAGGAGTTA ATCTCCGGTG AGTCTTCGAG TTCCGGCAGC GAGTTTTTCA CAAATTCATC ATCGGAGGTT GTGCAGTCTT CTTCTTCATC GTTCTCTTCT TCGTCGAGCG GTGAATCTGA GGAAGTCTCG AAGAAAAACG ACGCCGTGGA AGACGGGAAT GAGAGCGGAG AGAGATTAAA CGCACGTGAC TGTGACGGAT CATCTGTCAA CGGCAACAAC AGCCTGTGTA ACAGAAAGGA ATGTGTGAAT GAAGAGAAAG AACAACTCAG TCCAGTATCA ATCTTAGAAT GTCCTTTTAA AGACAATGGA AGTGATGATG AAGACGATGA GAACACTGAT CAAAATGGTA TACATGAGAA AATTGCAAGA AAAAGCAGGA GATTAAATGG TTTGGTACGG CTTGAGCCAC TAGACTTGGA TAAACGCATA AAGGAGTATG TAGAGAGACA AGAAGAGTAC TCATTTCACA AGCTAGAGAC CGAAGAGGAC GAATCAGAAA ACCAAGCAAA CCGCTTGTTT GCTCTTGTGA AATTGAGAAT CGGCGAAACA AATGACCTAC TAGCTTCCAA AGTAGCGGAT AATCTATTGT TAGATTATCT TCAAGAAGAT AATATTGGGC CAAAAGAGGA GACATTAATG GTGAAGAAAG CAGAAGATTG GGTTATGGGT AGACAAGATG AGATGTTTAT GAGTTGGGAA GTGAAAGAGA AGAGAGAGGT TTATGTGAAG GAAATGAAGT GGGGTTGCAT TAAAGGAGAT GAGAGAGAGA ATGTGGTTGA AGAGTTGGCT AATGGTTTCT TCACTTCCTT TGTGGATGAA TTCATCTTCG ACTTAGTGTT GTGA
Length1434
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20298910.. 20301866
Download Sequence
A.thaliana
AGI-codeAT4G11780.1
Description
TAIR curator summary
Alias[TRM10][TON1 Recruiting Motif 10]
Gene coexpression
MR
MR Locus Description
21.8403 Ahg925744
24.6577 Ahg493503 O-Glycosyl hydrolases family 17 protein
28.0357 Ahg900119
37.1887 Ahg942510 transposable element gene
37.7889 Ahg907271
42.8019 Ahg890578 HSP20-like chaperone
50.4975 Ahg477013 Terpenoid cyclases family protein
58.532 Ahg316947 Pectin lyase-like superfamily protein
59.1693 Ahg919270 Pectin lyase-like superfamily protein
65.4981 Ahg487573 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression