Detail



ID : Ahg490016

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490016|fgenesh2_kg.6__3150__AT4G11970.2
Sequence
AGAGTTTAAA GAGGCATGTC TTCTGATACT GCTAAGGAAA ATGCATCTGT TGTCGATTCA TCTTTGACTG ATTGGAAACA AGATATAGGA AACTCTGATG ATCCAGAGAG TTCAAGTCAC AGAAGCAAAG AAGACCATAA ACTGTCCAAA GTGGAAGTTG AACGACGTAA CTTTTCTGAT CAATTAGAAA GTTCTAACCC GAATAAGAAT AGTAAACCGG GGTACCAGAC GAGATATTTC ATCATCAAAA GTCTGAATTA TGATAATATA CAAGTTTCAG TCGAAAAAGG GATTTGGGCT ACTCAAGTTA TGAATGAGCC AATATTGGAA GGCGCTTTTC ACAAATCTGG CAGAGTGATT TTAATCTTCA GCGTGAACAT GAGCGGATTC TTCCAAGGGT ATGCAGAGAT GTTGTCTCCT GTGGGATGGA GGAGAGACCA TATATGGAGC CAGGGAGGTG GTAAAAACAA TTCGTGGGGA CGTAGTTTTA AAGTAAAATG GTTGCGATTG AGTGAATTGC CTTTTCAGAA AACACTTCAT CTCAAGAATC CTTTGAATGA TTACAAGCCT GTCAAGATTA GCCGAGATTG CCAGGAATTA CCTGAAGATA TCGGTGGAGC ACTTTGTGAA CTGCTTGATG CAAATAGCTG CGATGACGGG TTGCTGAATA GCTCCTCTAG GGATGATTAT TCTACAAAAA AGTCCCGCGC AGAACCTCCA TCTTCCTCAG GAGACGAAGA GTACAATAAC AATCTTTGGG GCCATACACC GATGCCTTAC CCTCCTGCGG TCTACCCAAA CCAGGATGAC TTAAGCAGAT TTCATCTTGC ACAGCAGAGA GGATATGGAG TTTCCTCGGA ATATCTCCAT ACATCATCAG GTGCATCTAA CTCTCGCACG GAGCAAGAAA AGTCTTTACG ATTCAACTCA TGGTGTTTGC CTTTGGAAAG CCCTCTTGCG AATTCCCTAA CCGATGATGA TTTTCTTGAC ATGTCTTATG AAGAATACGT TGAAACCCAC AGCAGATGCA TGAAACAACT TGGTCTTCCT GTCAGTGATT CCACAATCAC GAGCCATACA AGAGCCATCA AGTAAAACAG ATGATGTAAG CAATGGTTCT TCGAAAGATC AGCCATCATC AAGAAAGAGA GGACGGAATT CATCCTAGGG TTCAACTACA AAACTGGCAA CTCTACCACA AAAATCACAT CAAAATGCAT AAGAATATGT CATGCCACTT CGATTGTACG GTGATGGAGA AGTTGTTGTC ATGTTGTAAC ATGTTCATTT GGCCGAAACC AGAAGACTGT AACTAGAAGT TTCTTCTTTT GATTGCCGAA ACTTGTACAG TTTCAACTTC AAATATGGCA ACATGTAAAC TTTTGGAAAC CTAAACCCTA AATTGGGTTT G 
Length1411
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20417428.. 20419894
Download Sequence
A.thaliana
AGI-codeAT4G11970.1
DescriptionYTH family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.7945 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
37.9473 Ahg492502 polyprenyltransferase 1
38.3145 Ahg890756 Pre-mRNA-processing-splicing factor
40.3485 Ahg479316 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
42.7785 Ahg331488 Tetratricopeptide repeat (TPR)-like superfamily protein
43.3935 Ahg897667
46.9894 Ahg487080 importin alpha isoform 9
56.2583 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
57.0088 Ahg924987 Protein of unknown function (DUF3755)
67.3053 Ahg939040 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression