Detail



ID : Ahg490236

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490236|fgenesh2_kg.6__3370__AT4G03240.1
Sequence
GTGACAGAGC CGCCATGGCT ACAGCTTCAA GGTTTCTACG GACATTGCCG AGGTTTCTCA AGCTTTCTCC AACCCTTCTC CGTAGCAATG GCGTAAGATT TTCAAGCAAT TTGATTCAGG GTTCCATAGA ACCGTTGGGT TCCTTCTGGC GAATAGGATC TCGAATCAGC CATGATTCTT TTACTACCAG AAGCTTCTCT TCTCAAGGTC CTGCTTCTGT CGATTATAGT TCGGTTTTGC AGGAGGATGA GTTTCACAAA TTAGCCAACT TCACAATAAA TCACCTTCTT GAGAAAATTG AGGATTATGG TGATAATGTT CAGATTGATG GTTTCGACAT AGATTATGGG AATGAAGTTC TTACCCTTAA GCTTGGATCT TTAGGCACAT ATGTACTGAA TAAGCAAACT CCAAATCGAC AAATCTGGAT GTCTTCACCC GTGAGTGGCC CTTCTAGATT CGACTGGGAT CGTGATGCTA ATGCATGGAT TTACCGTAGA ACCGAAGCAA AGTTGCATAA ACTCCTGGAA GAGGAGTTAG AGAATCTATG TGGTGAACCA ATCCAACTCT CATAAAGAAG GCTTTAAAAC AATATTTTTA GCCAAAGGGT TTCATCTAGG AACTTGAAAC TGCTATACCC TTTTAAAGGT ATATCTATGA AACATCCAGA GGAATAAACA AACAAGGCAC AAGACAAAGT TGTTTCAGTG TGAAACCCGA TTAGTGTTTG TGAATCTACT TTAAACAGTA ATTTTTCATA GTGACATTGT TACTAGTCTC TTTGTTTAAT CAGAGCTGAA GCTTCTTTTT AC 
Length812
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21829678.. 21830998
Download Sequence
A.thaliana
AGI-codeAT4G03240.1
Descriptionfrataxin homolog
TAIR curator summaryEncodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress.
Alias[ATFH][FH][frataxin homolog]
Gene coexpression
MR
MR Locus Description
13.2288 Ahg481712 cyclin-dependent kinase-subunit 1
16.2481 Ahg472287 Spc97 / Spc98 family of spindle pole body (SBP) component
17.6068 Ahg929155 Tetratricopeptide repeat (TPR)-like superfamily protein
26.9444 Ahg929946 Ribosomal L18p/L5e family protein
29.5296 Ahg942359 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein
39.7995 Ahg898853 F-box/RNI-like superfamily protein
43.5431 Ahg928482 rhomboid protein-related
44.4522 Ahg925363
59.7244 Ahg486246 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
71.9027 Ahg490707
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression