Detail



ID : Ahg490329

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490329|fgenesh2_kg.6__3463__AT4G02400.1
Sequence
CAAAAAAAAA ACAAGGCAGA GGCAGCCATG GGAGAAAAGA GGAGATCTAG TTCGAAAACC CTAGCTAAGA ACAAGAAGAG GCAAGGTCCT CATTTACCTA ATTCGATACT CAAGACTATT GCCAATGAGA AACGTCCTTT GAACTCCGAC GAAGAAGACG ATGAGATCCA TTCCGATGGT GAGAACGTCG ATATGTATGA GTACGAAGAA GGTGAGCCTG AGGAAGAGTC CAAGAAAAAC AATCGCTATG ACCGTGTCGA TAACTACGAA TACGAGCTTC CCGAGGATTT CGAGTCAGAT GATGATGAAG ATGGTGGTAA CAGCGACAAT GAGGATGGTG AAGGTGATGA TGATAGACAC ACTCGTATGT TGCAAGATCT CACTGGAATG CCAAGTGCAG CCTTTCAAGG AGAGAGTAAG AGAAGACCTG TACTCTTTAC TGAAGCGTAT CCAGAGTCTG AATTCAATCC TACCCGTGAT GTTCTGGAGG GTAAAGGCCT CATTTCAGTT GAGGACCTTT TGGCGCCTCT TGAAGGAAAA CCTGGGTTTA ATGATCTTAA GAAGAGGATC AACCGGATGC AGAAAGATAC TCAGTCTGTT GTTCATGCTC CTCTGCCAAA GCCAGAACGA GAAAGACTGG AACGGAAAGC TGTGAAAGGA CTAGTTGAGA AAGAGTTTAA TAAGTGGGTG CATCTGGTCA AGAGGAATAG GGAGGCACCA ACTGTTTACT TCAACCAAAC TGTCAGTGTT GGCTACTCTA CAGTTGGCGC AATAGCATCA GAGTTTCAAC CCAGGACTGA ATTTGAGAAG AAAATGGCTT CTGTACTCAA TGATAACGAG CTTGGGGAGG CTCACAAAGA AGATGGCGCT AAGCTTCTTG AATTGAACGA GGCAACTTAT TTGACTTATA ATATAATCTG GCATGTGGCT GCGTTGAAGA TAGTGTCAAT GGAAGACCAC ATCAAGTACC GTGACCACAT TGCCAAGATG CGGAGCCTGC TCTTCCGCCA TGAACTGAAA AGTAAACGTA TCAAGAAGAT TAAGTCTAAA ACTTATCATC GCCTTAAAGG CAAAGACCTG AAGAAATCGG CCATGGGAGC ATTTATGGAC CCAGAAATGG CTAAAGAAGA GGCTATTAAG CAGGAGACTA GACGAGTAGA GGAACGGATG ACGTTGAAGC ACAAAAACAC CGGAAAATGG GCCAAACGCA TGTTAAGCCG TGGACTGAAT GAGAGATATG ATGGAACTCG GGCAGCTATA TCTGAACAAC TTCAGATTAA TGCCACTTTG TCAAGAAAGA TGAACTCCAC GAACGATGGA AGTAGCAGTG ATGAGAGCGA CGATGAGGAA GAGTTGAGTT GTGGTTCAGA TCTGGATACT CCTTCTAAAT TGATAGCAAA AGCCAGGGAG AAGACACTGA AAACTGTGGA AGATGATGAA GTACCCAATT CTGGTCTTCT TTCATTACCT TTCATGGCTC GTGCTATGAA AAAGAAAAAC GAGGAAGTTA ATGAAGAAGC TAAACGTGCA TTTGAGGAGT ATGAAGAGTT GGAGAATTCT GGTGGAGCAG AAAATCCTAG AAAATCCGCT GATGTTAGTG GTAGAAGAGT ATTTGGTGCC ACCTCTAAAG TCGAAGCTCC AAAAGAGTCT AAAAAGGACT CGGACAACTT TTATGACAAC AGTGATAGTG AAAATGATAT GGAAGGCATA GAAAATAATG ACCTTGTGGG TATTGGAGAT ACTGCTTCAC CTGCTAGAAA CACTGGAGCC ATAACAGAGG CTGAGAAGCT CGATGATGAT GTTGAAAATC CAGCTTCTAA GACAACATTT GATGTTGCCT TATTTGCGTC AGGCTCTTGG AAGAAGATGA AAGGCTGCCA AAATGCAGAA TCCAAAAAAC CTCCAAAGAC ACATAAACCA ATTTCAAAGG GCCAAGATAA AAAGGAATCG AGAGATGAAG AAAGTGAAGA TTCCGAGAGT GAAGCAGAGC AAATGGTTGA TGGGATTTTG ACATCTGCTT CAAAGGAAAC CTATGAAATT CCTTCTCAAG CAGAGCTTAT ACAACGTGCT TTTGCTGGTG ATGACGTTGT TGATGAATTT GAGAAGGATA AACAAGAGGT TCTAAATCAG GAAGTTCCTG AACCGGAAAA ACCAGTTCTA GTTCCTGGTT GGGGACAATG GACCAATATC CAAAGAAAGA GAGGTTTACC TTCATGGATG GTTAGAGAAC ATGAAGATGC AAAGAAAAAG AGAAAGCTAG ATCTCAAAAC AAGGAAAGAC TATCGTCTCA GAAATGTTAT CATATCAGAA AAAGCCGATA AAAAGGCTGA CAAACTTCAT ACGACGACTC TACCTTTCCC ATATACATCT AAGGAAGTTT TCGAACACAG CATGCGCATG CCTATAGGAC CCGAGTTTAA TCCTGCGACT ATTGTTGGAG CTCTAAACCG ACCAGAGGTT GTGAAGAAAG CTGGTGTGAT AATTAAACCG GTCAAATTTG AGGAAGTGAA TCCAAACGAG AAAGTTGATG ATGAAAACCC TCGAAGCCAT CAAAAACAAA GACCCAAAAA GGGTAGTAAA ACCAGTAAAG GTCAAAGCAA AATCAAGTCC AAGCTAAAGA CTAAAGCTTA GCTCCCAAGA TTTTTGTATT CTCAAACTTG TTTAGACACA AATTTTGATC CGAAAAGAAA AAGTTTTGCT TTGTAATTTG TCTTATTTAT 
Length2720
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22270727.. 22274517
Download Sequence
A.thaliana
AGI-codeAT4G02400.1
DescriptionU3 ribonucleoprotein (Utp) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg920450 periodic tryptophan protein 2
8.24621 Ahg353746 Initiation factor eIF-4 gamma, MA3
11.7473 Ahg943587 Ribosomal RNA processing Brix domain protein
11.9583 Ahg940355 DEA(D/H)-box RNA helicase family protein
13.7477 Ahg313471
13.7477 Ahg492264 fibrillarin 2
14 Ahg483610
14.4914 Ahg496951
14.6969 Ahg487674 Transducin/WD40 repeat-like superfamily protein
14.7309 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression