Detail



ID : Ahg490512

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490512|fgenesh2_kg.6__3646__AT4G00540.2
Sequence
AAACCCTTTT GAGTCTCTCC TAGCGATTTC AAGTCTTCCT CTCATAGATT AGGATTTTTT GCGATTGAAA TTATAGTTTA AAATAGATAT GTAGTTAGTT TCTTCGATAT ATTCTCGTTA AGATGTGGCT GTTAATTAGG GTTTTATCAA TTTCTTGAGG AATTATGACA GAACCTTTTG ATTTGAATCG ATCCGAGTCC GAATCTGATA ACAACAACAA CGTTATTCCT ACTTTTGCAA TTGATAACTC TTCTCAAGGA TACAGAAGAG TGAGTGGTCC GACCCGAAGA TCAACTAAAG GAGGATGGAC ATCCGAAGAG GACAAAATTT TGACGAAAGC TGTGCAAATG TACGAGGAGA AGAACTGGAA AAAAATTGCT GAATGTCTTC CCAAGCGGAA AGAGAAGAGG AGGAATGATG TTCAATGTCA GCACCGTTGG CTAAAAGTTC TTCATCCAGA CCTCAACAAA GGAGCTTGGA GAAAATATGA AGATGATCTC TTAAGTGAAT TGGTTAAGGA ATATATGGAG AAAGATAAGC CTCAATGGTC GAAAATTGCA AAACAACTCC CTGGTCGCAT CGGCAAGCAA TGTCGTGAAA GGTGGCATAA TCATTTAAAT CCGACTATTA GAAAAACTCC ATGGACTAGA GAAGAGGAAT TAATTCTCGT TCAAGCGCAA AGAGAACATG GCAATAAGTG GGCAGAGATT GCCAAGCTCT TGTCTGGAAG GACAGAGAAT AATATTAAGA ACCACTGGAA CTGCTCAGTT AAGAAGAGAT TGAAGCAGTT TCCTAGTAAC CTCTTCTCTG GTGTCATCAA TAGTTGTAGA CATGAATACA ACTTTTTCAA TCAAAGCAAC ACGATGGCCG AGAGTTGCAT AACATTTCAA ATCAAGGAAG CTGAAAAGAG TCCTCAAAGA GATTCCTTGG AGTTAACTTT AGGACTTATG AATTGGAGGA ACACGCCTTC ATCCACAAGC TCTCTTAGAG GAGAAGAATC AGTCTCATCA TCAGTAGAAT CAGATTGGTC AAGACTCAAT GTATCAGAGA GTGTAGAAAC TCCACAGAGC AGCAACAACG ATAATGTGTG CGTAAAGGAA GTGAAGGAGA TGCAAGAGAG ACTGAGGATG GCTGCGAGTA CTTTCAACAC ACCCTCCATT ATCTCCAAAA GAAGCTCACC AGCTTCAGGT TTGAAACGGC TCAGACAAAA AGACGACACG CCGTTTCAAA TAGATGCTCG AAGTCACATG TCAAGCGAGG AAAAGCAGTC AATTTCATCC AAATACAGAC GCAACACTTG CTCTGGCTCA AAACCCTTGG AGAGGCGTTT AGATTTTGAC TTTCTGTGAC AAGACTTTTT AGCTTTCGTT AACTCTTTAA ACTTTGCTTT ATTTTTCTTG ATGTACAAGT AAACATAGGT TTGAT 
Length1425
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23235649.. 23237999
Download Sequence
A.thaliana
AGI-codeAT4G00540.1
Descriptionmyb domain protein 3r2
TAIR curator summaryEncodes a putative c-myb-like transcription factor. Member of a class of domain proteins containing structural features of the vertebrate c-Myb proto-oncoprotein, including the presence of three Myb motifs (R1,R2,R3).
Alias[ATMYB3R2][MYB3R-2][MYB3R2][PC-MYB2][myb domain protein 3r2][MYB DOMAIN PROTEIN 3R2][C-MYB-LIKE TRANSCRIPTION FACTOR 3R-2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg948060 IAA-leucine-resistant (ILR1)-like 3
5.65685 Ahg896308 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
6.7082 Ahg888708
8.66025 Ahg487975 RNA-binding (RRM/RBD/RNP motifs) family protein
13.9642 Ahg357682
15.6844 Ahg471555 eukaryotic elongation factor 5A-1
22.8035 Ahg476637 RING/U-box superfamily protein
25.4951 Ahg942093
25.923 Ahg947362 Protein of unknown function (DUF674)
26.2679 Ahg496685 neurofilament triplet H protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression