| Annotation |
|---|
| Description | jgi|Araly1|490520|fgenesh2_kg.6__3654__AT4G00460.2 |
| Sequence |
TTCATCGTCT GGATGGTAAG ATCAGTTCTT CCTTTCTATC ATCGGACGGT CCACATTTAC TCCATTTTCC GGTCGCCGGC TTAAAGAAGG TTTTGGATTC AACAAGAGGG AATTTGGTTT TTTTTGCTTT AAACGTACGT TTCAAATTCA AGAAGAAGCT TTAAAGAAGA AACAGAACAA GAACAAAAAG GACAGACCTT TGAGGAGTTT TCAGATTAAA GATGGAGAAT TTATCGAATC CAGATGAAAA CGACGATGTG GGGTATCATC AATCACCTAG ATCCATTGAC CAAAATGATC AATCAGCAGC AGAAACTCCG GTTTACTCGA CGATGAGCAT TGATTCCTTT GTTTATCCTC GAACTTGTTC AGAGAGCACT TCAGGTTTTT CAGACCAGAT AGATGAAACC AACAGCTTCT GTAGTGAAGC TTCTCCTTGT AATTGGCCTG TCCTCACTGA ATCTAAGAGC TCCAAATGTC TCTCTGGTTT AGAGGTGCAA TCAAATGAAA GTCTTGCAGT CCAAGAAATT TCAGAACCAG AACTTGAGAC AATGAAGGAA AGATTCGCAA AGCTTCTACT TGGAGAAGAC ATGTCAGGGA GTGGTAAAGG AGTTTGCACT GCAGTAACGA TCTCAAACGC AATTACCAAT CTTTATGCTA CAGTGTTTGG ACAGAATCTG AGGTTAGAGC CGTTAGAAAC AGAGAAGAGA GCAATGTGGA AGAGAGAGAT GAATTGTCTC TTATCGGTAT GCGATTACAT AGTCGAATTC ATCCCTAGAT GTCAGAATCT AAGCAATGGA GCTACTGTTG AGGTGATGGA GAGTAGACCA AGAGCAGATA TCTATATCAA CTTACCTGCA TTGAGAAAGC TAGATTCAAT GCTTATGGAA GCATTGGATG GTTTTCAAAA CACAGAGTTT TGGTATGCAG AAGAAGGAAG TTTGTCGATG AAATCAGCGC GTTCTTCGAC TGGATCATTC AGGAAAGTGA TTGTACAGAG GAAAGAAGAG AAATGGTGGT TACCAATTCC TCTAGTGCCA CCAGAAGGTT TGTCAGATAA AGCCAGAAAA CAACTCAAAA ACAAGAGAGA GAGTACCAAT CAGATTCACA AAGCTGCAAT GGCTATCAAC AGTAGCATTC TCAGTGAAAT GGAGATTCCA GAGTCTTACA TGACAACTCT TCCAAAGTGT GGTAAAAGCA GTGTTGGAGA TTCAATTTAC CGTTACATGA GTGGTTCGGG TCGGTTTTTC CCAGAACAAC TGTTAGATTG TCTGAACATA GCCTCTGAGC ATGAAGCTGT TCAGTTAGCA GATAGAGTAG AAGCTTCAAT GTACACATGG AGACGCAAAG CTTGTCTTAG TAACTCTAAG AGCTCATGGA ACATGGTGAA AGATCTTATG TCAAATACAG AGAGAACAGA CAAGAACTAT GTAATGGCTG AGAGAGCAGA GACTCTCCTC TTCTGTTTGA AACAGCGTTA TCCAGAATTG TCTCAGACAT CATTAGATAT ATGCAAGATT CAGTACAATA AGGATGTTGG AAAAGCTGTG TTGGAGAGCT ACTCAAGAGT ACTTGAAGGT TTAGCTTTTA ACATAGTTGC TTGGATTGAT GATGTTCTCT ATGTAGACAA AACCATGAGA GGTAGTGAAT AA |
| Length | 1652 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 23264755.. 23267271 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G00460.2 |
| Description | RHO guanyl-nucleotide exchange factor 3 |
| TAIR curator summary | Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. |
| Alias | [ATROPGEF3][ROPGEF3][ROP (rho of plants) guanine nucleotide exchange factor 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 20.9762 |
Ahg899894 | WPP domain protein 1 |
| 22.1359 |
Ahg350326 | mitotic-like cyclin 3B from Arabidopsis |
| 26.4953 |
Ahg486700 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 37.4833 |
Ahg491360 | Transducin family protein / WD-40 repeat family protein |
| 41.7133 |
Ahg492267 | Oxoglutarate/iron-dependent oxygenase |
| 57.1839 |
Ahg485479 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 59.1946 |
Ahg490446 | RING/U-box superfamily protein |
| 68.1249 |
Ahg489572 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 74.1889 |
Ahg490341 | glycosyl hydrolase 9B13 |
| 81.5353 |
Ahg474144 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|