Detail



ID : Ahg490546

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490546|fgenesh2_kg.6__3680__AT4G00220.1
Sequence
AAAAGCATCA TAGTCTCGAT GAGTTAAATC CATGTATCTC AAAACCCTAA TCACCAATTA GCTAGTAAAA GAAAAGGAAA ATAAAGGTAG TTGTGAGGTA AATAAGGAAG ATGAGCAGTA GCGGAAACCC TAGCAGCAGC GGTGGAGGAG GCCCTTGCGG CGCGTGCAAG TTCTTGAGAA GGAAGTGTGT CGCTGGCTGC ATCTTCGCGC CTTACTTTGA CTCCGAGCAA GGAGCGGCGC ACTTCGCGGC GGTTCACAAG GTGTTCGGAG CGAGCAACGT CTCCAAACTC CTCCAACATG TTCCCGAGCA TAAACGACCA GACGCCGTCG TTTCAATCTG CTTTGAGGCT CAGGCTCGTC TCAGAGACCC TATTTACGGC TGCGTCTCTC ACATCGTCTC TCTTCAGCAA CAGGTGGTAA GTTTGCAAAC TGAGCTTTCA TATCTACAAG CACACTTAGC AACTCTAGAG CTGCCACAAC CTCAACCACC ACAGGTTCCG GTGTCGTCTT CTGGATCTCT GCAGGCTCTC TCCATAACGG ACCTCCCATC AATATCGCCG TCGGTGTACG ACCTCTCCTC CATCTTCGAG CCGGTCATGT CCTCCACGTG GGCCATGCAG CAACAACCAC GACCGTCTGA TCATCTCTTC GGCGTCCCGT CATCGTCTAA TATCGGCGGA GGCGGTGAGC TCCAAGCACT GGCGCGTGAG TTTATTCACG GTGGGCAAAT GCCAGCTCAG CCATCCCCGG GAACCAGTGG TTCTGGCTCA ACAGTGATAA AACGAGAATG AAGTTATTTC TATAAAATGT TTGTTTATTT GGACCGTAAG AGATCTATAG TTAGCGATAT GTTTCTCCTT GTAATATATA TATACTTGGT CGAATTCGTA TTTAAATTGT TGGCTAGAAT GTTAATATAA GAACTATATG ATTTACATTG 
Length940
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23413278.. 23415549
Download Sequence
A.thaliana
AGI-codeAT4G00220.1
DescriptionLateral organ boundaries (LOB) domain family protein
TAIR curator summaryEncodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Alias[JLO][LBD30][JAGGED LATERAL ORGANS][LOB DOMAIN-CONTAINING PROTEIN 30]
Gene coexpression
MR
MR Locus Description
16.1864 Ahg936491
45.299 Ahg914199 Plant invertase/pectin methylesterase inhibitor superfamily
55 Ahg496685 neurofilament triplet H protein-related
95.3887 Ahg494580 RmlC-like cupins superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression