Detail



ID : Ahg490556

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490556|fgenesh2_kg.6__3690__AT4G00120.1
Sequence
ATGGAAAATG GTAAGTATAA AAAGAAAGGA CTGTGCGACT CTTGTGTCTT GTCCAAAAGC AGATCCAACC ACAGCCCCAA AAGAAGCATG ATGGAGCCTC AGCCTCATCA ACTCCTCATG GATTGGAACA AAGCTAATGA TCTTATCACA CAAGAACACG CAGCTTTTCT CCATGATCCT CATCTCATGT TAGATCCACC TCCCGAAACC CTAATTCACT TGGAAGAAGA CGAAGAGTAC GATGAAGACA TGGATGCTAT GAAGGAGATG CAGTACATGA TCGCCGTCAT GCAGCCCGTA GACATCGACC CTGCCACCGT CCCTAAGCCG AACCGCCGTA ACGTAAAGAT AAGCGACGAT CCTCAGACGG TGGTTGCTCG TCGGCGTCGG GAAAGGATCA GCGAGAAGAT CCGAATTCTC AAGAGGATCG TGCCTGGCGG TGCAAAGATG GACACAGCTT CGATGCTAGA CGAAGCCATC CGTTACACCA AGTTCTTGAA ACGGCAGGTG AGGATTCTTC AGCCTCACTC TCAGATTGGA GCTCCTATGG CTGACCCCTC TTACCTTTGT TATTACCACA ACTCCCAACC CTGATATATA TAGATGCATA AGGATTCGAT CCAAGATTGT ATGGGTAATT GTGTACCAAG TCTTTTATCT TGATATCATA TGCATTGGTG AATAATGATA TTGAATTATT GATTGTATTA GGGTTTGATC AGTTTGTATG CAAGCTTTGG CCTGCAAATT AATTTCCGAT GAAGAATATA TATATCAAAT AGTACTTGTT TAACTATAAT TTGAATCAAT TATATATCTG AATCTGATGA GTGTAGGTTA TAGATATATA GGGATTAGCA AAAAACAATT GAAACAACGA TTATTATGCC CTTATATTAA AAATCATCCA CCCCATCGAG AACAAGACTC AAGAGGGTTT CCATATTGGA GAATAATGAA ACATTTGAGA AAAAAAAGAA ATTTAGAAAG AAACTTTAAA TATAAAAATT GAAAAGAAGC AAAGTGAGAT AACTCTGTCT TGATGGAACG CCGGCCAAAA GTGATCGTCG TGATTTGGTT AGCATCTTGA CCTTGATAAG GTCGATCGAT CGAGGAGTGT ATCCGTTTCA AACAACACAC 
Length1140
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23460401.. 23461845
Download Sequence
A.thaliana
AGI-codeAT4G00120.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[EDA33][GT140][IND][IND1][EMBRYO SAC DEVELOPMENT ARREST 33][INDEHISCENT]
Gene coexpression
MR
MR Locus Description
7.54983 Ahg483935 Pollen Ole e 1 allergen and extensin family protein
11.5758 Ahg936571
15.0665 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
29.2916 Ahg494175 MATE efflux family protein
45.2217 Ahg331706 oligopeptide transporter 9
46.9042 Ahg481945 LOB domain-containing protein 13
50.6853 Ahg473001
58.6345 Ahg917939 floral meristem identity control protein LEAFY (LFY)
63.8279 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
65.4523 Ahg335722 myb domain protein 117
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression