Detail



ID : Ahg490617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490617|fgenesh2_kg.7__50__AT4G38530.1
Sequence
ATGCTCTCAG AACTAACAAG TAAGAAGAAT AAGAAGAATG TCGGAGAGTT TCAAAGTGTG CTTCTGTTGT AGCAGAAGCT TCAAGGAGAA AACGAGGGAA CCACCAGTGA GCATCAAGAG ACTCTTCGAA GCTTACTCAA GAAACGGCAA GATGTCTTTC GATGAGCTTC TTAGATTTGT GAGTGAAGTT CAAGGAGAGC GGCACGCAGG GTTGGACTAC GTGCAGGATA TCTTCCACAG CGTTAAACAC CACAACATTT TTCATCACCA TGGACTTGTT CATCTCAACG CCTTCTATCG GTACCTCTTC AGCGATACCA ACTCTCCTCT TCCCATGTCT GGCCAGGTGC ATCATGACAT GAAGGCGCCG TTATCGCATT ACTTTGTCTA CACGGGACAC AACTCTTACT TGACTGGGAA CCAAGTGAAC AGCAGAAGCA GCGTGGAGCC GATCGTGCAG GCTCTCAGAA AAGGCGTAAA GGTGATCGAG CTCGACTTAT GGCCTAATCC TTCAGGGAAC GCTGCTGAAG TTCGTCATGG CAGGACATTT ACATCGCATG AAGATCTGCA GAAATGTCTG AACGCCATCA AGGATAACGC GTTTTACGTG TCTGACTATC CAGTCGTGAT CACTCTCGAA GATCATTTGC CACCCAATCT TCAAGCGCAA GTTGCTAGGA TGTTAACTAA AACATTCAGA GGGATGCTGT TTCGTTGTGG CTCAGAGAGT TGGAAGCATT TTCCATCACC AGAAGAACTT AAGAAGAAGA TTCTCATCTC TACGAAGCCT CCAAAGGAGT ATCTTGAGAG CAAAACTGTA CAGACAACAA GAACTCCTAT GGTTAAAGAG ACTTCGTGGA GCAGAGTAGC GAGTAGTACT AATATGGCAC GGGGAGGAGA AAACAAGATT CTTGAAGAAG AAGGAGAATT GGAGAGTGAA GCTGTAGGAG GATATAGAGA CTTGATCGCA ATCCACGCTG CAAACTGCAA AGATCCTTTG AAGGATTGCT TGAGTGATGA TCCAGAGAAG CCTCGAAGGG TTAGCATGGA CGAGCAGTGG CTAGAGACTA TGGTTAGGAC CAGAGGAACG GATCTTGTCA GGTTTACACA GAGGAATCTG GTGAGGATAT ATCCAAAGGG TACAAGAGTG GACTCGTCAA ACTACGATCC CCATGTTGGT TGGACACACG GTGCTCAAAT GGTTGCTTTT AACATGCAAG GACATGGGAA GCAACTATGG ATAATGCAAG GAATGTTCAG GGCGAATGGT GGATGTGGGT ACGTTAAAAA GCCTCGCATC TTGCTAGACG AGCACACACT CTTCGACCCT TGCAAAAGGC TTCCCATCAA GACCACTCTC AAGGTGAAGA TTTACACAGG CGAAGGATGG GATTTGGATT TCCATCAGAC ACATTTTGAT CAATACTCTC CTCCAGATTT CTTCGTAAAG ATTGGAATAG CAGGAGTTCC GAGAGACACG GTCTCATACA GAACGGAAAC AGCTGTCGAT CAGTGGTTTC CTATATGGAG CAACGACGAG TTCCTGTTTC AGCTGTGTGT TCCAGAACTG GCGCTTCTGT GGTTCAAGGT CCAAGACTAC GACAATGACA CCCAGAATGA TTTCGCAGGA CAGACATGTC TTCCTCTGCC GGAACTGAAG TCCGGAGTCA GAGCCGTCCG GCTTCACGAT CGGGCAGGCA AGGCTTACAA AAACACGAGG CTTCTCGTCA GCTTCGCCTT GGATCCTCCT TATACGTTTC ACTGAAACTC GTTTTCTTTC C 
Length1781
Protein Sequence
Protein Residue
Map Locationscaffold_7: 136738.. 139082
Download Sequence
A.thaliana
AGI-codeAT4G38530.1
Descriptionphospholipase C1
TAIR curator summaryEncodes a putative phosphoinositide-specific phospholipase C. There are two genes called ATPLC1, one corresponding to AT4g38530 (this one) and one corresponding to AT5g58670.
Alias[ATPLC1][PLC1][phospholipase C1]
Gene coexpression
MR
MR Locus Description
67.0597 Ahg921700 ENTH/VHS/GAT family protein
67.3795 Ahg919779 branched-chain amino acid transaminase 2
80.2247 Ahg470152
93.835 Ahg930820
96.4365 Ahg928998 zinc transporter 1 precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression