Detail



ID : Ahg490769

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490769|fgenesh2_kg.7__202__AT4G39840.1
Sequence
CCTACCAAAT ACGAACAATC ACATAAATAC AAAAAAATGC AGAATCATAA AAAAATTAGA CAAGTAGCAG AGAATCTGAA ACATGACGGT GAGATTAAAC AGTAGTAATA GTACATTGAT ATTATCAAAG GGACTGAATT AGTAAATTCT CTGGTCTCCA TCTTCTCTAT TATCGTTCAC ACACACACAA ACACTCATAT ATAAACACAT ACATATGCAC ACTGTCACTA ATGCTTCTCT CTCTCTCTTT CTCTTTTCCT ATATATTGAC AAGCTTGCGA TCTCTCTTCG CAAGATCTGT CTGAAACAGT GAGGGGATTC CTAGGTTTCA GAGCAAAGTA ATGTCTCCAC TCAAGGACTT GTGTTTTAGA AAGGTACTCT TGTTGTTGCT CTATTCCAGT CTCTTCCTTT TCTCTTCTTC TTCTTTCTTT GCCTCCTCAG TTGATGATCA TGAGCTACAA CGAATAGATC CTCATTTTCG AGTGAGAAGA TTGTTGGTGA AAGATCTGGA TTCAACTGGT GATGATGATG AATCCAATCT TCCTCCTCCT CCTAAGAAGA AGAAGCTTAT TACTGGCTCT GTTTCATCAT CATCATCATC ATCTGGTACT AAGAAGAATC AAACCAAGCT CATTAAACCA ATCTCTTCTT CGTCTTCTTC CACCAAGAAC CAAACTAAAC TCGCCAAGAC CTCCATGGGT ACATCTCACA AACTTGACTC CACCAAATCT TCTTCTAACA CAACCAAGAC CAGCTCCGAG CTCAAGAAGC TCAATTCCGG AACAAAACCC ACAAATTCTA CTTCTTCAAT CAAGAAATCA GCAGATCTAT CCAAATCAAG CTCACCCAAA AACAAAACCA CCACAAAATC CAAACTTTCT TCACCTCCTC CTTCAGAGAA GAAATCACCA CCATCCTCAA AACCAGTGAC CAAATCGAAA CAACCGGAGA AAGAAATCAA ACCATTCTGG CTCGACGACG AGGAAGACGA AGATTTCGTA AGCGAATTCA GAGATCTACC AACAAAATTC CAAAGATCCC TAATCCCAGA CCTAGAACGA ATCTCAACCA CATCCAAAAA CTACATCAAC AAAGCCAACA AAGAGATCAC CAAAAACTTC AAACCCTATT TCGGCAACAA ATACGCACCA ACCATCGCTT CCGTAGTCTC TTTCGTCTTC ATCCTCGTCC CTCTACTCTT AGTCTCCCTC ATTTTCAACA GATTCAAAGC TTACTTCTCA CTCCAGAAGA TCCTAATCTT CATCCAAATC TACCTCTCGA TCTACTTCTC AATCCTATGC CTCTCATCGC TCGTCACTGG AATCGAACCA CTCAAGTTCC TCTACGCAAC ATCGAGCTCA ACATACGTTT GCTTGCAGAT CCTGCAAACC CTAGGCTACG TCTTCTACCT CTTGCTTCTT CTCATGTACC TCGTTCTCGT CTTCTCTACG GATTGTGGTT TGGGCCTGAA AGTATTGGGC TTGGCGCAGA CCTTCGTGGG CTTTGCTGTT GGTTTGCATT ATTACGTGGC GGTGTTTCAT AGGGTGGTGC TTCGTCAGCC TCCGAAGACG AACTGGAAGA TACACGGTGT TTATGCCACG TGTTTTCTTT TGATTTGTCT GTTATCTAAT GCTGAGAGGA GGAAGAAGGA GTATTTGGAA GAAGGCGGTG ACGAAGGGAA GAAAAATTGA AATTTTCTTT ATTTTATTTT TCTCTATCTT TGTATTTTTA TATTTTAAAT TTTAGCTGAG AAATGCAATA GAAGAACAAT TTACTGGTGG ATGGTTGGAA ACTTTTTTTT TTTTATATAC TTCAATTGTA TTTATAATAA ATAAATCGAT AAATGTGGAA TAAAAGTTCA TAATCTCATT 
Length1870
Protein Sequence
Protein Residue
Map Locationscaffold_7: 741866.. 743741
Download Sequence
A.thaliana
AGI-codeAT4G39840.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.94987 Ahg476210 Calcium-dependent lipid-binding (CaLB domain) family protein
14.5258 Ahg490219 pre-mRNA splicing factor-related
22.9129 Ahg493755 EF hand calcium-binding protein family
31.3688 Ahg901754 ENTH/VHS/GAT family protein
32.311 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
33.1059 Ahg486038 salt-inducible zinc finger 1
37.5233 Ahg488249 SWIB/MDM2 domain superfamily protein
38.4578 Ahg485970 O-Glycosyl hydrolases family 17 protein
44.7437 Ahg481911 Protein phosphatase 2C family protein
48.9898 Ahg950974 SEUSS-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression