Detail



ID : Ahg490839

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490839|fgenesh2_kg.7__272__AT4G37770.1
Sequence
GATCGTAGCT TACCTACAAA CATCACTCAC AATCCAATCA AAACAACACC TTTTATTCTC TCTCAAAATC TTCTTTATTC TCCTACTCGC TCTCTATCTC TAGAGCTAAA GAAAATGGGT CTCTTGTCAA AGAAAGCTAC TTGCAACACT CATGGCCAAG ATTCTTCGTA TTTTTTGGGT TGGGAAGAGT ATGAGAAAAA TCCTTACGAC GAGATCAAAA ACCCAGACGG CATTATCCAA ATGGGTCTAG CAGAAAATCA GTTATCTTTC GATCTCATTG AGTCATGGCT TGCTAAGAAC CCTGACGCAG CAAATTTCAA AAGGGAAGGC CAATCTATAT TTCGAGAATT AGCTCTCTTT CAAGATTATC ATGGCCTTCC TTCCTTCAAG AATGCTATGG CAGATTTCAT GTCGGAAAAT AGAGGAAACC GAGTTTCTTT CAATCCGAAC AAGCTTGTCC TCACCGCTGG TGCTACTTCA GCTAACGAAA CTCTCATGTT CTGTCTCGCT GATCGTGGAG ATGCTTTCTT GCTCCCTACG CCATATTATC CAGGATTTGA TAGGGATTTG AAATGGAGAA CCGGAGCTGA GATTGTACCG ATCCAGTGTA CGAGTGCAAA CGGATTCCGC ATCACAAAAT CAGCACTTGA AGAAGCCTAC GAGCAAGCTC AAAAGCTTAA CCTAAAAGTT AAAGGAGTCC TTATAACCAA CCCATCTAAC CCGTTGGGTA CTACAACGAC ACGAACTGAA CTAAACCATC TCTTGGACTT CATCTCACGT AAGAAGATAC ATTTGATAAG CGATGAGATC TACTCGGGTA CCGTTTTCAC CTCTCCCGGA TTCATTAGCG TAATGGAAGT CCTCAAAGAC CGAAAGCTCG AAAACACCGA TGTTTTCGAC CGTGTCCACA TCGTTTACAG TTTGTCTAAA GATCTAGGCC TACCTGGTTT TCGCGTTGGA GCGATTTACT CCAACGATGA TTTTGTTGTC TCCGCAGCGA CAAAAATGTC CAGTTTCGGT CTAATCTCTT CTCAAACACA ATACCTCTTG TCCACATTGC TATCCGACAA GAACTTCACT AAAAACTACC TCGAAGAGAA CCAAATCCGG CTCAAGAACA GATACAAGAA GCTCGTCTCG GGTCTAGAGG CTGCAGGCAT CGAGTGTCTC AAGAGCAACG CCGGACTCTT CTGTTGGGTT GACATGAGAC ACTTATTAAA ATCAAACACG TTCGAAGCCG AGATTGAGCT ATGGAAAAAG ATCGTTTACG AGGTTAAACT CAATATCTCT CCCGGTTCTT CGTGCCATTG CAACGAACCG GGTTGGTTTA GGGTTTGTTT TGCGAATATG AGCGAAGAGA CATTAAAGGT AGCGTTGGAT AGATTGAAGG GGTTCGTTGA TGGACCGTCG TCTACTAGAA GAAGTCAAAT TGAACATCAA AGACTAAAGA ATTTAAGGAA GATGAAAGTC TCTAATTGGG TTTTCCGGCT ATCGTTTCAC GACCGTGAAC CCGAGGAACG ATAGTCTGGT TTTTTTATAA AGTTAAAAGT GTAATAAGTT TTTTTTGGTC ATTATTTATG AGTGATTGTT TTTTTTTTAA TATCAGCTTT TGATATTTTG GTATAGTTTT TAGGAAGAAA GTTCACTCAT TCCGTACGTG AAAATGGATA ATGCAGTGTG GCTTTTCTTA TGTATAATTT ACTGTCACTT TCTAATGATA TTTCAAA 
Length1727
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1037049.. 1039082
Download Sequence
A.thaliana
AGI-codeAT4G37770.1
Description1-amino-cyclopropane-1-carboxylate synthase 8
TAIR curator summaryEncodes an auxin inducible ACC synthase.
Alias[ACS8][1-amino-cyclopropane-1-carboxylate synthase 8]
Gene coexpression
MR
MR Locus Description
31.0483 Ahg935696
45.8912 Ahg478816 Pentatricopeptide repeat (PPR) superfamily protein
51.5267 Ahg937828
54.4151 Ahg323032 cytochrome P450, family 702, subfamily A, polypeptide 8
57.2364 Ahg475383 GDSL-like Lipase/Acylhydrolase superfamily protein
62.6099 Ahg916924 Protein of unknown function (DUF1278)
73.6885 Ahg939179 Tetratricopeptide repeat (TPR)-like superfamily protein
75.326 Ahg952263 copper ion binding;electron carriers
76.1906 Ahg943180
78.613 Ahg934565
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression