Detail



ID : Ahg490898

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490898|fgenesh2_kg.7__331__AT4G36910.1
Sequence
CGTTTAGCCA TTAAAGTCAC AGTCACACTT TCGCTTTTCC CAATACAAAC AAGCGGTGAC GCATATCTCC TCCTCCATCA CTCTTTTACT TCCGGCGATC TCTCTCCGAC GGCCAATGGA CGCCGTCCTA TACTCTGTTC CACTCTCCTT CACGCGCCTA CGCGCATCAT CCTCTCCTTC CTCGCCGTAT CTTCTTCCGC CGAGGTTTCT CTCCGTTCAG CCATGTCACA AATTCACCTT CTCTCGAAGC TTCCCTTCCA AATCCAGGAT TCCTTCAGCT TCTTCCGCCG CCGGTTCCAC GTTGATGAAG AATTCCTCTT CGCCAAGAAG TGGAGTGTAC ACTGTTGGTG AGTTCATGAC AAAGAAGGAT GACTTGCACG TGGTGAAACC TACGACTACT GTGGATCAAG CTCTGGAACT CCTTGTGGAG AATAGAATTA CAGGATTTCC TGTGATAGAT GACGACTGGA AATTGGTTGG GCTTGTTTCA GATTATGACT TGTTGGCTTT GGACTCCATA TCTGGTAGTG GAAGAACAGA GAATTCCATG TTCCCTGAGG TTGACAGCAC TTGGAAAACT TTCAATGCAG TGCAAAAGCT ACTCAGCAAA ACCAATGGGA AGCTTGTTGG AGATTTAATG ACACCGGCTC CACTAGTTGT TGAGGAAAAA ACCAACCTCG AAGATGCTGC TAAAATATTG CTTGAGACAA AATATCGCCG GCTCCCTGTG GTAGATTCTG ATGGCAAATT GGTCGGTATT ATCACAAGAG GAAACGTGGT TAGAGCCGCG CTTCAAATAA AGCGTTCTGG TGATAGGAAT GCTTGATTAA GATATATATC ACAAAGAAGA AAATAGCTTT GTAGAAGAAA GCAATGATCA AACCTTCTCC AGAGAATAAA AGTGAGAAAC CGTGACAATT GTATCATGTA TTAGTAGAAT AAGAACCATA ACTTGTATTA CAGTTTGCAT CGAAGTTAAG CCTGCCTAGT AATCTCGAGA AGAATCAAAG GTAAGTTTTT TCTATTTTTG CAGAATCAGC TTCTCTGTTT GTTTGATGGG TTAGGTTATC AGATTCTTTG GGTATTTGAT TCTCATCCAA TTATGCTTTC TTAGAAAGAA AAAAAAACTT GTTTCCTACT TTCTACATTT GGTTAACCAC CAAAGTAACA GCCTTTTAAG GTATTTTAAT TGATTTTGGT TCAACC 
Length1206
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1356510.. 1359115
Download Sequence
A.thaliana
AGI-codeAT4G36910.1
DescriptionCystathionine beta-synthase (CBS) family protein
TAIR curator summaryHas a cystathionine Beta-synthase domain.
Alias[CBSX1][CDCP2][LEJ2][CBS domain containing protein 1][CYSTATHIONE [BETA]-SYNTHASE DOMAIN-CONTAINING PROTEIN 2][LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg486690 RNA-binding (RRM/RBD/RNP motifs) family protein
3.74166 Ahg476008 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
4.89898 Ahg946285 Pentatricopeptide repeat (PPR) superfamily protein
7.93725 Ahg332986 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
10.4881 Ahg484590 nodulin MtN21 /EamA-like transporter family protein
11.4891 Ahg483030 isoamylase 1
11.4891 Ahg473594 5'-3' exonuclease family protein
14.8997 Ahg920676 homology to ABI2
15.2971 Ahg475314 NAD(P)-linked oxidoreductase superfamily protein
17.5499 Ahg921505 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression