Detail


ID : Ahg490933

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490933|fgenesh2_kg.7__366__AT4G37160.1
Sequence
ATGAAACAGA CCAATCTGCT GCTATGTAAA TTATTCATAG GAACCCTGTT TTGGTTGGGC TCTGTTTTAG TTAATGCAGA AGACCCATAT CTGTTCTACA CTTGGACTGT TACTTACGGC ACACGATATC CTCTAGGTGT TCCTCAAGAG GTCATTCTTA TCAATGGACA GTTCCCTGGT CCAGCGATTG AAGCGGTCAC AAACAACAAC ATTGTTGTTA ATCTCATTAA CAAGCTCGAC GAGCCATTCC TCATTACCTG GAATGGAGTG AAGCAGAGGA GGACATCGTG GCAAGATGGA GTATTGGGAA CAAACTGTCC GATCCAACCA AACTCGAACT GGACTTACCA GTTTCAACTT AAAGATCAAA TCGGTACTTA CACTTACTTC GCTTCCACGT CAATGCATCG AGCCAGTGGT GCTTTTGGTG CTCTCAACAT TAACCAGAGA GCTGTTATTA CGACTCCTTA TCCAACACCC GATGGAGATT TCACCCTCCT CGTCTCTGAC TGGTTCTCAA ATATGACCCA CAAGGACTTG CGAAAAGGGC TCGACGCAGG CTCTGTTCTT CCTCTTCCTG ATGCTCTTCT CATCAATGGA GTCTCTAAAG GTTTAATCTT TACCGGTCAA CAAGGTAAAA CATATAAGTT CCGGGTATCG AATGTCGGTA TAGCGACATC GATAAATTTT AGGATTCAAA ATCACACAAT GAGCCTCATT GAAGTAGAAG GCGCTCACAC TCTTCAGGAG AGCTATGAGT CGCTTGACGT CCACGTTGGT CAGTCCATGA CCGTCCTGGT CACTTTAAAA GCTTCTGTGA GGGACTATTT CATCGTGGCC TCAACCCGGT TTACTAAACC GGTACTAACC ACAACCGCGA GTCTCCGTTA CCAAGGCTCC AAAAACGCTG CATATGGGCC CCTCCCCATT GGTCCTACTT ACCATATCCA TTGGTCTATG AAACAAGCAA GAACCATAAG GATGAATTTG ACGGCAAATG CTGCAAGGCC AAACCCACAA GGATCATTTC ATTACGGGAC TATACCGATA AACCGAACTA TAGTCCTAGC CAATGCGGCC ACATTGATCT ACGGGAAACT TCGGTACACG GTAAACCGAA TATCATACAT CAACCCAACA ACACCATTGA AACTCGCCGA TTGGTATAAC ATTTCGGGCG TGTTCGATTT CAAGACAATC ATTAGCACTC CAACAACCGG ACCCGCTCAT TTTGGTACAT CGGTTATCAA CGTTGAACTT CATGAGTTCG TCGAAATCGT TTTCCAAAAC GACGAAAGAT CAATTCAATC TTGGCACATG GACGGTACTA GCGCCTATGC TGTCGGATAC GGATCAGGAA CATGGAATGT GACCATGAGG AAACGTTACA ACTTGGTTGA TGCTGTTCCA AGACACACTT TTCAGGTGTA TCCGTTATCG TGGACAAGCA TATTGGTGTC ATTAGATAAC AAAGGAATGT GGAATCTTAG GTCACAAATA TGGTTGAGGA GGTATTTAGG ACAAGAGCTT TATGTTCGTG TTTGGAACGA TGAGAAGTCT CCCTACACTG AAGCTGAACC GCCTCTTAAC GCTCTTTATT GCGGCAAAGC CAAACGTCCC ATTTAGA
Length1627
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1488013.. 1490416
Download Sequence
A.thaliana
AGI-codeAT4G37160.1
DescriptionSKU5 similar 15
TAIR curator summary
Alias[sks15][SKU5 similar 15]
Gene coexpression
MR
MR Locus Description
2 Ahg891369 Family of unknown function (DUF577)
2.44949 Ahg321676
3.4641 Ahg913812
7.48331 Ahg326692 Protein of unknown function (DUF295)
8.66025 Ahg924382
12.4499 Ahg479822 transposable element gene
12.7279 Ahg951789 Leucine-rich repeat (LRR) family protein
13.6748 Ahg480339 Expressed protein
22.0454 Ahg312054 F-box family protein
24.6577 Ahg914032
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression