Detail



ID : Ahg490934

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490934|fgenesh2_kg.7__367__AT4G37170.1
Sequence
ATGATGAATC ACTCAAATGC GAGAAAGTTA AGCACTTTTC ATGGATTGAT ATTCAAGAGC AACCTATTAT CCTCTTCTTA CGCCTCACAG AAGCGATTTT CAGATAAAAA GTTCTTCAAT TCGAAGCTCG AGGACGGTGG TGTTGTGGTG GAGCGATTAT GTAGAGCTAA TAGATTTGGT GAAGCCATTG ATGTTTTATG TGGACAGAAG CTTTTAAGAG AAGCTGTTCA ACTTCTGGGT CGAGCAAAGA AGCCACCTGC TTCTACTTAT TGCAATCTTA TTCAAGTTTG CAGCCAAACA CGCGCGCTTG AAGAAGGTAA GAAGGTCCAT GAACACATTA GGGCTTCTGG GTTTGTACCT GGGATTGTTA TATGGAACCG TATTTTGGGA ATGTATGCGA AATGTGGTAG CTTGGTTGAT GCACGAAAGG TGTTCGACGA AATGCCGGAG AGAGATGTTT GCTCGTGGAA TGTAATGGTT AATGGGTATG CGGATGTTGG GTTGCTTGAG GAAGCGAGAA ATCTGTTTGA TGAAATGCCT GAAAGAGATA GTTATTCGTG GACGGCTATG GTTACGGGTT ATGTTAAGAA GGATCAGCCT GAAGAGGCAT TGGTTCTGTA TAGCTTGATG CAAAGAGTAC CGAATTCCAA ACCCAACATT TTTACAGTTT CCAGTGCAGT GGCTGCTGCT GCTGGGATGA AATGTATCCG TAGAGGGAAA GAGATTCATG GGCATATCGT TCGAGCTGGT TTGGATTCAG ATGAGGTGCT CTGGAGTTCG TTGATGGATA TGTATGGAAA ATGTGGCTGT ATTGATGAAG CAAGAAATAT CTTTGATAAG ATAATTGACA AAGATGTTGT GTCGTGGACA TCAATGATAG ATAGGTATTT CAAGTCTAGT AGATGGCGAG AAGGGTTTTC TTTGTTTTCT GAGTTGATAG GTTCTTGTGA ACGGCCTAAT GAGTATACTT TTTCTGGAGT TTTGAACGCT TGTGCTGATC TCACAACAGA AGAGCTAGGG AGGCAAGTTC ATGGATACAT GACAAGAGTT GGGTTTGATC CCTACTCTTT TGCATCAAGC TCTCTTATAG ACATGTACAC GAAATGTGGA AACATTGAGA GCGCAAGACA CGTTGTTGAC GGATGTCCTA AACCTGATTT AGTTTCTTTG ACTTCTTTGA TCGGTGGGTA TGCCCAGAAT GGGAAACCTG ATGAAGCCTT GAAGTATTTC GACTTGCTCC TCAAATCCGG CACAAAACCT GATCATGTTA CCTTTGTAAA CGTCCTCTCC GCTTGTACTC ATGCCGGGTT GGTCGAAAAA GGACTGGAAT TCTTCTATTC TATAACAGAG AAACACGATT TAACGCATAC TTCTGATCAT TACACTTGTC TTGTTGATCT ATTAGCTCGG TCTGGAAGAT TCGAACAGTT AAAAAGCGTC ATTAGCGAAA TGCCGATGAA ACCGAGTAAG TTTCTATGGG CTTCCGTTCT CGGTGGGTGT AGCACTTACG GAAACATTGA CCTAGCAGAG GAAGCGGCTC AAGAACTGTT CAAGATAGAA CCCGAAAATC CTGTTACTTA TGTTACAATG GCTAATATCT ATGCTGCAGC AGGAAAATGG GAGGAAGAAG GGAAAATGAG AAAGAGAATG CAAGAAATAG GAATCACCAA ACAGCCTGGT TCAAGCTGGA CCGAGATAAA ACGGAAGCGT CATGTATTCA TAGCAGCGGA TACTTCGCAT CCAATGTATA ACCAAATAAT TGAGTTCTTG GGTGAATTGA GGGAGAAGAT GAAAGAAGAA GGGTATGTTC CCGCTACAAG TCTTGTATTG CACGATGTAG AAGATGAACA AAAAGAAGAG AATCTTGTGT ATCATAGCGA GAAACTTGCT GTTGCGTTTG CGATTCTATC GACAGAAGAA GGAACGGCGA TTAAGGTGTT TAAGAACTTG AGGTCTTGTG TGGATTGTCA CAGTGCTATT AAGTTCATAT CGAAAATCAC AAAGAGGAAG ATAACCATAA GGGACTCGAC TCGGTTTCAT TGCTTTGAGA ATGGACAATG TTCTTGCAGA GATTATTGGT AA 
Length2082
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1491984.. 1494065
Download Sequence
A.thaliana
AGI-codeAT4G37170.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg355482 TCP-1/cpn60 chaperonin family protein
14.3527 Ahg920552 Tetratricopeptide repeat (TPR)-like superfamily protein
19.8242 Ahg482157 Protein of unknown function (DUF1218)
20.2485 Ahg486304 Ubiquitin carboxyl-terminal hydrolase family protein
40.2492 Ahg480596 Pentatricopeptide repeat (PPR) superfamily protein
48.1041 Ahg928561 Pentatricopeptide repeat (PPR) superfamily protein
49.4166 Ahg358310 glycine-rich RNA-binding protein 3
59.397 Ahg311569 Tetratricopeptide repeat (TPR)-like superfamily protein
67.1714 Ahg929843
68.1249 Ahg946316 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression