Detail



ID : Ahg490960

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490960|fgenesh2_kg.7__393__AT4G36740.1
Sequence
ACTTCTCACA TTTCATAAAA AGTGAGACAA ATTAAGACAG AGATAGAGAG ATCCAAGAAC ATGAACCACA CGGTGGATGA TCAGAACATG GCTTTTATCT CTCAACTGTA CCCTGATGTC TACACTCAGT TAGTACCACA ACCAGGAGAA GTGAAGCAAC CGAAGCGGAG GAGGAAGAAG AGTAAAGGAG CGTTGGCTTC CGGAGACGGA AGCAACAGTT TGTTTAGGAA GAGGAAGCTA ACCGATGAAC AAGTGAACAT GTTGGAGATG AGTTTTGGTG ATGAGCACAA ACTTGAGTCG GAGAGGAAAG ATAGACTTGC GGCGGAGCTA GGGCTTGACC CTCGTCAAGT TGCCGTTTGG TTTCAGAACC GTCGTGCACG GTGGAAGAAC AAAAGGCTCG AGGAGGAGTA CAATAAACTC AAGAACTCAC ATGATAACGT CGTTGTCGAC AAGTGCCGAC TTGAATCTGA GGTTATTCAG CTCAAAGAAC AACTCTATGA CGCAGAGAGG GAAATCCAAA GATTAGCAGA AAGAGTAGAA GTAGGCTCAA GCAACAGTCC GATTTCGTCT TCTGTTTCCG TCGAAGCTAA TGAAGCGCCA TTTTTCGGAG ACTATAAAGT CGGAGATGAT GGCGATGACT ATGATAACTT CTTTTATCCG GTACCGGAAA ACAGTTACAT CGATGAAGCG GAATGGATGA ATCTATACAT ATAAAATTAC TAGCTTAATG TGATATTTTA ATTATATCAA GTTAGTATTG TGAATTAGGG AAGCATTATT TTAAGTAAAT TTAGTAGATT ATATAACTGT T 
Length811
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1598130.. 1600045
Download Sequence
A.thaliana
AGI-codeAT4G36740.1
Descriptionhomeobox protein 40
TAIR curator summaryEncodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Alias[ATHB40][HB-5][HB40][homeobox protein 40]
Gene coexpression
MR
MR Locus Description
19.3907 Ahg896435 terpene synthase-like sequence-1,8-cineole
20.1246 Ahg903715 Protein of unknown function (DUF789)
25.4165 Ahg952572
26.5895 Ahg938638
30.9839 Ahg487772 GDP dissociation inhibitor family protein / Rab GTPase activator family protein
33.1059 Ahg343928
36.1663 Ahg930832
36.9865 Ahg936340
47.7493 Ahg945937
59.6238 Ahg898750
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression