Detail



ID : Ahg491601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491601|fgenesh2_kg.7__1034__AT4G31400.1
Sequence
AAACACAGAC CTAAGAAGGA TTCGAGCTCT CTCTGTACGA TGCAAGCAAA AATCAATTCT TTCTTCAAGC CCTCTTCTTC TTCTATCGCT GCCTCAGTAA CAACAGACGC AGACGATGGT TTAGCTGTCT GGGAGAACAA TCGGAACGCC ATCGTCAACA CCTACCAGCG TCGATCTGCG ATTCCCGATA GAAGTCAAGT GCTTAAAGGA TGCATCGGGA AGCCACTGAA GAAAGGATCT TCCTCTGTAC CTAAAAATCT CAAAAAGAAG CGCAATTATA CGCAATTCCA CTTAGAGTTG GGCCAATCTG ATTTTCTTCT CAGACATTGC CCACAATGTG GAGCTAAGTA TGCTCCTGGA GATGAATTAG ACGAGAAGAA CCATCAAAGT TTTCACAAGG ACTATATGTA TGGACTCCCT TTTAAGGGTT GGCAGAACGA GAAAGCCTTC ACATCGCCTT CGTTCAACAA GAACCGCATC ATTATGGTAT CAGAAAATGA TTCCCCTGCA CATAGAAACA AGGTGCAAGA GGTTGTGAAA ATGATGGAAG TCGAGTTAGG TGAGGATTGG ATTCTTCACC AACATTGTAA GGTTTATCTA TTCATATCCT CTCAGAGGAT CTCCGGATGT CTTGTTGCAG AACCAATTAA GGAAGCATTT AAGCTCATAC CTTCTCCTGA TGATGAAAGA CAGTTACAAA AAGAGAGCAC CTCCTCGCCT TCAACCTCCA TTCAGTTTGG AAACATTGTG TTACAAAGAG AAGTATCTAA AAGATGTCGA GCATCAGATG ATAGATTAGA CTGCGGAGCA ATAGTATGCG AGGAAGAAGC TAAACCAGAT GTTTGTGGGA TTAGAGCGAT TTGGGTCTCA CCTTCTAACA GAAGAAAAGG CATAGCCACA TGGTTACTCG ATACCACGAG GGAAAGCTTT TGCAACAATG GGTGCATGTT GGAGAAATCT CAGTTAGCAT TTTCACAACC AAGCTCCATT GGAAGATCTT TTGGATCTAA TTATTTTGGA ACTTGTTCAT TCTTAGTTTA CAAAGCTCAG CTAATTGATA CTCTCTTTTC TTAAACGGCA TAGATTTCAT TACATCACAA CCATCATCTT CACTGTTACT C 
Length1121
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4086203.. 4088191
Download Sequence
A.thaliana
AGI-codeAT4G31400.1
Descriptiondamaged DNA binding;DNA-directed DNA polymerases
TAIR curator summaryEncodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.
Alias[AtCTF7][CTF7][ECO1][CHROMOSOME TRANSMISSION FIDELITY 7]
Gene coexpression
MR
MR Locus Description
27.9106 Ahg928698
47.8957 Ahg488500 Putative adipose-regulatory protein (Seipin)
65.7267 Ahg492831 other RNA
69.3542 Ahg478343 P-loop containing nucleoside triphosphate hydrolases superfamily protein
78.8226 Ahg479186 Plant invertase/pectin methylesterase inhibitor superfamily protein
96.8298 Ahg493215 C2H2-like zinc finger protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression