Detail


ID : Ahg491721

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491721|fgenesh2_kg.7__1154__AT4G30290.1
Sequence
ATCAACAATA TACATCTGAT CAAAACTCCT AGAGAGATCT AATAAAATGA AGTCTTTTGC GTTCTTGATT CTCTTTCTCT TTGCAGCACA ATCTATGAGC GTCTATGCAG GCAGCTTTCA CAAAGACGTT AAAATACATT GGGGTGATGG TCGAGGAAAG ATTCACGATA ATGAAGGGAA ACTTCTTTCT CTCTCGCTTG ACAAATCTTC TGGTTCAGGT TTCCAATCTA ATCAAGAGTT TCTCTATGGC AAAGCCGAGG TTCAAATGAA ACTTGTCCCT GGTAACTCTG CTGGAACCGT CACAACATTC TATCTTAAAT CTCCGGGAAC TACATGGGAT GAGATTGATT TCGAGTTCTT GGGGAACATA AGTGGTCATC CATATACTCT CCACACTAAT GTTTACACAA AAGGCTCAGG AGACAAAGAA CAACAGTTTC ATCTATGGTT TGACCCAACC GCTAACTTCC ACACTTACTG CATCACATGG AATCCTCAAA GGATTATTTT TACTGTTGAT GGGATTCCAA TTAGAGAGTT CATGAATGCC GAGTCACGTG GAGTCCCATT CCCAACGAAG CAACCAATGA GGCTCTATGC GAGTCTCTGG GAAGCTGAGC ATTGGGCTAC AAGGGGAGGA TTAGAGAAAA CAGATTGGTC AAAAGCTCCT TTCACCGCTT TTTACAGAAA CTACAATGTC GAAGGATGTG TTTGGGCTAA TGGAAAATCA GCTTGTCCAG CAAATTCTCA ATGGTTCACT CAAAAACTCG ATTCGAATGG CCAGAAAAGA ATGAAAGGGG TACAAAGTAA ATACATGGTT TACAACTATT GCACCGATAA AAAGAGGTTT CCTCGAGGTG TTCCTCCAGA GTGCAGCTAA ATTATTGATT CTTTGATTCG TGAATAAGTT ACTTGGCATT GTCTTTGTAA CTCAATGGTT CTTCTTTTCT ATTATTTTTC A
Length961
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4539259.. 4540416
Download Sequence
A.thaliana
AGI-codeAT4G30290.1
Descriptionxyloglucan endotransglucosylase/hydrolase 19
TAIR curator summaryEncodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.
Alias[ATXTH19][XTH19][XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19][xyloglucan endotransglucosylase/hydrolase 19]
Gene coexpression
MR
MR Locus Description
15.0997 Virus3797
16.7332 Virus0325
21.3542 Ahg907103 Cystatin/monellin superfamily protein
27.9285 Ahg913562 cytochrome P450, family 714, subfamily A, polypeptide 1
28.2666 Ahg311681 pfkB-like carbohydrate kinase family protein
35.7771 Ahg917103 Cysteine-rich protein
38.6782 Virus1147
42.9884 Virus2949
45.4313 Ahg936814
45.4313 Ahg936795
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression