Detail



ID : Ahg491739

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491739|fgenesh2_kg.7__1172__AT4G30140.1
Sequence
ACAATAAGCC AACTTTTCTT CTTCTCTCAT TAAGCTTTTT CTCTCCTCAT TTTTCGTGTA ATTCGAAAAT GGTCGAGGGA GAGTCCAAGG CATTGTGGAT TATTGTGGCC ACCGTGTTTG CAGTCGCGGC GGTCGCACCA GCGGCACATG GACAACAAGC GCCGTGTTAC TTCGTGTTTG GAGACTCTGT CTTCGACAAT GGTAACAACA ATGCCTTGAA CACCAAGGCT AAGGTCAACT ATTTACCTTA TGGTATAGAT TTTCCTCAAG GTCCGACCGG TCGGTTTAGC AACGGTCGGA ATATTCCAGA CGTTATCGCT GAACTAGCGG GTTTCAATGA CTCAATTCCA CCGTTCGCCG GAGCATCACA AGCACAAGCT AACATCGGAC TCAACTATGC TTCCGGTGCC GGAGGTATCC GCGAAGACAC CAGCGAAAAT ATGGGTGAGA GAATCAGTTT GAGAAAGCAA ATAAACAACC ACCTGTCGGC GATCATAAAC GCGGCGGTGC CACGGAGTCA GTTAAGGCAA TGTCTATACA CAATCAACAT CGGAAGCAAC GATTACCTCA ACAACTACTT CTTGTCGCCT CCTACTTTAG CACGTCGTAT ATATAATCCT GACCAGTACG CTCGATCTCT CATACGCCTC TACCGTTTTT ATTTGGAGCA ATTGTACGTA CTAGGAGCGA GGAATGTAGC TTTGTTCAGT ATCGGTAAGA TCGGATGTAC ACCACGAATT GTTGCTACCC TTGGTGGCGG CACTGGCTGT GCAGAAGAAG TGAACCAAGC CGCGAATCTC TTCAACATTA AACTCAAAGA CCTAGTCACT ACTTTTAACA ACAAATCTGG AGCTAAGTTC ACTTATGTTG ATCTCTTCTC TGGAAATGCT GAAGATTTCG CAGCTCTAGG GATTACGGTT GGTGATAGGA GTTGCTGTAC TGTTAATCCG GGGGAAGAAC TTTGTGCTGC GAACGGACCG GTTTGTCCAG ACCGAAACAA ATACATATTC TGGGATAACG TGCATACTAC GGAAGTGATC AATACTGTGG TGGCTAACGC AGCGTTTAAC GGACCTATAG CTGCTCCGTT CAACATATCC CAGCTTGTGA ATTAATATTA GGGCTTTATA TCCATTGTTA AAATGGCATA GTCCTCTATG TAAATCCTGG TTTCGTCTAG ATGGAAACCA TATATCAGAC ACATAATAGA CTGAATAATG AATAAAAAGG ATTG 
Length1234
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4631012.. 4633384
Download Sequence
A.thaliana
AGI-codeAT4G30140.1
DescriptionGDSL-like Lipase/Acylhydrolase superfamily protein
TAIR curator summaryMember of the GDSL lipase/esterase family of proteins that functions as cutinase. Expressed in pollen and at the zone of lateral root emergence.
Alias[CDEF1][CUTICLE DESTRUCTING FACTOR 1]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg935659 D-arabinono-1,4-lactone oxidase family protein
8.3666 Ahg331046 Serine protease inhibitor, potato inhibitor I-type family protein
8.48528 Ahg934014 CBL-interacting protein kinase 13
8.7178 Ahg494086 RmlC-like cupins superfamily protein
16.0624 Ahg920350 Peroxidase superfamily protein
17.7482 Ahg945877
21.2603 Ahg478237 laccase 7
22.8473 Ahg945701 trehalase 1
26.6833 Ahg492419 Protein of unknown function (DUF679)
27.6586 Ahg948802 Serine protease inhibitor, potato inhibitor I-type family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression