Detail



ID : Ahg491747

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491747|fgenesh2_kg.7__1180__AT4G30070.1
Sequence
AAAATATGGA GAGGATGACA TCAATTGTCT TCATTGTTAA CTTACTTATC ATTTTTACGT CAGTTGTGAA TCAGACTAGA GCAGATACGT GTACAGATGG ATTAGGTCTT TGCAACGGCT GCGATGAGAG ATGCAAGGCC AAGCACGGAC CATCGAGCGA AAGCAACTGT GATCGCAGTA TTGGGGTAGG GCTATGCGTG TGCTACTACC AATGTGGATC CCCATCACCA CCCGTGCAGA AGAAATGCAA CGGTGGGGCT GGTATATGTA GTCAAAGATG TCAAGGAACA TGTTGTGATA TGAACTGTGC ACAAAAGTAT AATGGTGGAC ATGGATTTTG TAACACTCTT GGTACATTTA GTTTGTGCCA ATGCGAATAT CCTTGTTAAA GTCGGTTGAC AAAAG 
Length405
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4674034.. 4675354
Download Sequence
A.thaliana
AGI-codeAT4G30070.1
Descriptionlow-molecular-weight cysteine-rich 59
TAIR curator summaryEncodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.
Alias[LCR59][low-molecular-weight cysteine-rich 59]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg898687
4.3589 Ahg898691
10.9545 Ahg939929
12.8452 Ahg913771
13.4907 Ahg494340 WRKY family transcription factor
19.6214 Virus0532
19.6214 Virus1779
19.6214 Ahg949956
20.7846 Ahg948943
20.8567 Ahg313224 Domain of unknown function DUF220
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression