Detail



ID : Ahg491983

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491983|fgenesh2_kg.7__1416__AT4G28000.1
Sequence
ATGGAGCAGA AGAGCGTGTT GTTTTCCGCG TTAGGGGTTG GTGTTGGTTT AGGCATCGGT CTAGCTTCGG GTCAGAGTTT GGGTAAATGG GCAAACGGGT CTATTTCTGC GGAGGATGGA CTTACCGGAG AGAAGATTGA GCAAGAGTTG GTTAGGCAGA TTGTTGATGG CAGAGAGAGT AGTGTCACTT TCGACGAGTT TCCTTATTAC CTAAGTGAGA AAACTCGGCT TTTATTGACG AGTGCAGCTT ATGTTCACCT AAAGCAATTT GATATCTCGA AGCACACGCG TAATCTTGCA CCGGGAAGTA AGGCCATTCT TCTGTCTGGA CCTGCTGATA CAGAGCAAGT ACGGATGCGT CAAGAAAGAA CCTGGACCTT GCGTAGGCAC ACAAGTGGCA ACGATCTTCA TTCAAGGGGC TTTGACGTTA CAAGTCATCC TCCGCGACTC AAGCGGAATG CTTCTGCTGC TTCTGATATG AGTAGCATAT CATCCCGTTC CGCAACTTCT GTTTCAGCTT CAAGCAAACG CAGTGCAAAC TTATGCTTTG ATGAGAGACT TTTCCTTCAG TCACTTTACA AGGTCTTGGT TTCGATTTCA GAAACCAATC CTATAATCAT ATACCTGAGG GACGTTGAGA AGCTTTGTCA GTCAGAAAGG TTCTACAAGT TGTTCCAGAG GCTCTTGACT AAGCTTTCTG GCCCTGTTTT GGTTCTTGGC TCAAGACTAT TGGAACCCGA AGATGACTGT CAAGAAGTAG GAGAGGGCAT TTCTGCTTTG TTTCCTTACA ACATCGAGAT CAGACCGCCA GAGGATGAAA ATCAACTCAT GAGCTGGAAA ACACGATTTG AAGATGACAT GAAAGTGATA CAGTTTCAGG ACAACAAGAA CCATATAGCA GAGGTTCTTG CGGCTAATGA TCTTGAATGT GATGACTTAG GTTCCATATG CCATGCAGAT ACAATGTTCC TAAGCAGTCA CATTGAGGAA ATTGTGGTTT CTGCAATCTC CTACCATCTG ATGCACAACA AAGAACCCGA ATACAAAAAC GGGAGGCTTG TAATATCTTC CACTAGCTTG TCCCATGGAC TGAGTATATT ACAGGAAGGT AACGGATGCT TTGAGGACTC CTTGAAGCTG GACACAAACA TTGACTCCAA GGAGGTGGCT CCTGATAATG AATTCGAGAA GCGCATAAGA CCAGAGGTTA TCCCAGCAAA TGAGATTGGT GTGACTTTTG CTGATATAGG TTCACTGGAT GAAACCAAAG AATCGCTTCA AGAGCTTGTC ATGCTTCCTC TACGTAGGCC TGACCTGTTC AAAGGTGGCC TTCTAAAGCC CTGCAGAGGA ATCCTCCTCT TTGGACCACC TGGTACTGGG AAAACTATGA TGGCAAAAGC CATTGCGAAC GAAGCTGGAG CTAGTTTTAT AAACGTGTCA ATGTCCACAA TCACTTCAAA ATGGTTTGGA GAAGACGAGA AGAACGTGAG AGCTTTGTTC ACCCTTGCGG CCAAAGTGTC TCCGACTATT ATATTTGTGG ATGAAGTGGA TAGCATGCTG GGACAGAGGA CAAGAGTCGG AGAGCATGAA GCTATGAGGA AGATCAAAAA TGAGTTCATG ACACATTGGG ATGGGCTTAT GTCGAATGCT GGTGACCGTA TTCTCGTTCT TGCAGCAACA AACAGGCCTT TTGATCTCGA TGAAGCCATC ATCAGGAGGT TTGAGAGAAG AATCATGGTG GGTCTTCCAT CGGTCGAGAG CAGAGAGAAG ATCTTAAGAA CCTTATTGTC AAAAGAGAAA ACAGAGAATC TTGATTTCCA TGAGCTTGCG CAGATGACAG ATGGTTATAG TGGAAGTGAT CTCAAGAACT TTTGCACAAC AGCAGCATAT CGACCAGTGA GGGAGCTGAT AAAGCAAGAG TGCTTGAAAG ACCAGGAGAG GAAGAAGAAA GAGGAAGCAA AGAAGAGTAG TGAAGAGGGA TCTGAAACAA AAGAAGAAGT ACCTGCGGAG AGAGACATAA CGTTGAGACC TTTGAGCATG GAAGACATGA AAGTAGCTAA AAGCCAGGTT GCTGCTAGTT TTGCAGCAGA AGGAGCAGGA ATGAACGAAC TCAAGCAGTG GAATGATTTG TATGGAGAAG GAGGCTCCAG GAAGAAGGAA CAGCTTTCTT ACTTCCTTTA A 
Length2181
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5529516.. 5537455
Download Sequence
A.thaliana
AGI-codeAT4G28000.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Virus1606
11.8322 Virus1771
11.8322 Virus3894
11.9164 Ahg947098
11.9164 Virus0496
12.1655 Ahg931224 RNA-binding (RRM/RBD/RNP motifs) family protein
14.3178 Ahg907832
15.2315 Ahg940796
16 Virus3579
19.3391 Ahg907253
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression