Detail


ID : Ahg492287

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492287|fgenesh2_kg.7__1720__AT4G25420.1
Sequence
AATCTCTGAA AATGGCCGTA AGTTTCGTAA CAACATCTCC TGAGGAAGAA GAAGCCAAAC CCAAACTAGG CCTTGGAAAT ATTCAAACTC CATTAATCTT CAATCCTTCA ATGCTTAACC TTCAACCCAA TATCCCTAAC CAATTCATTT GGCCTGACGA CGAAAAACCT TCCATCGACG TACCCGAGCT TGATGTTCCT CTCATCGATC TTCAAAACCT TCTCTCTGCT CCTTCCTCCA CTTTAGAAGC TTCCAGACAA ATCTCCGAGG CCTGTAAGAA GCACGGGTTC TTCCTCGTGG TCAATCACGG CATCAGCGAG AAGCTTATAT CAGACGCTCA TGAATACACG AGCCGTTTCT TTGATATGCC TCTCTCTGAA AAACAGAGGG TTCTTAGAAA ACCCGGCGAG AGTGTTGGCT ACGCAAGCAG TTTCACCGGC CGCTTCTCCA CCAAGCTTCC ATGGAAGGAA ACCCTTTCTT TCCGGTTTTG CGACGACAAG AGCCGCTCAA AATCTGTTCA AGATTACTTC TGCGATGCGT TGGGACATGG GTTTGAGCCA TTTGGGAAGG TGTATCAAGA GTACTGTGAG GCAATGAGTT CTCTCTCACT GAAGATCATG GAGCTTCTGG GGCTAAGTTT AGGCGTAAAC CGGGACTACT TTAGAGACTT TTTCGGAGAA AATGATTCAA TTATGAGACT GAACTACTAC CCTCCATGTC AGAAACCAGA TCTCACACTA GGAACAGGAC CTCATTGTGA TCCAACTTCT CTTACCATCC TTCACCAAGA CCATATCAAC GGCCTTCAAG TCTTTGTGGA AAATCAATGG CGCTCCATTC GTCCCAATCC CAAGGCCTTT GTGGTCAATA TCGGCGATAC TTTCATGGCT CTATCGAACG ATAGATACAA GAGCTGCTTG CACCGGGCGG TGGTGAACAG CGAGAGTGAG AGGAAATCAC TTGCATTCTT CTTGTGTCCC AAAAATGACA GAGTAGTGAA GCCACCAACA GAGCTTTTGG ACAGCATCAC ATCAAGAAGA TACCCTGACT TCACATGGTC TATGTTCCTT GAGTTCACTC AGAAACACTA TAGAGCAGAC ATGAACACTC TCCAAGCCTT CTCAGATTGG CTCACCAAAC CCAAGAAATA AAATATCCAT GTCT
Length1164
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6654433.. 6655909
Download Sequence
A.thaliana
AGI-codeAT4G25420.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryEncodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.
Alias[AT2301][ATGA20OX1][GA20OX1][GA5][ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1][GA REQUIRING 5]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg495065 ethylene response factor 110
15.4272 Ahg932969
22.0454 Ahg916294
28.931 Ahg492188 galactinol synthase 6
30.7571 Ahg891276
37.1349 Ahg915156
40.5463 Ahg942188 Plant self-incompatibility protein S1 family
40.9878 Ahg341194 Homeodomain-like superfamily protein
44.0227 Ahg917658 subtilase 4.13
50.6952 Ahg493352 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression