Detail



ID : Ahg492307

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492307|fgenesh2_kg.7__1740__AT4G25240.1
Sequence
GTAAGAAGAA ATTCAAAAAC CCACACTGAC ACTTTAACAC ATTGCTTCGT CTTCTCTACC GTTTCGATTC ACTCATATAA TGATTATGTC AAATCCGTAA GCTTTAAAAA AAAACCTAAC TTTATGGCGG CGACTTGTTC TGTGTTCCTC CTCTGCTTTG CTCTTCTCTC CGGCGTGTCT TTCGCGGCGG ACCCTTTCGT CTCCTACGAC TTCAGGGTTT CTTACATCAC CGCTTCCCCC CTCGGCGTTC CTCAACAGGT TATAGCTGTC AATGGGCAGT TTCCAGGACC TCTGCTTAAT GCCACTACCA ACTACAATGT TGTTGTTAAC GTTTTCAATC ATTTGGATGA GCCTCTCCTC TTGACTTGGC CTGGCATCCA AATGCGGCGT AACTCGTGGC AAGACGGTGT TCTTGGCACA AACTGCCCTA TTCCTCCCAG ATGGAACTTT ACTTACCAAT TTCAAGTGAA GGATCAAATT GGAAGCTTTT TCTACTCCCC TTCACTCAAC TTTCAGAGAG CATCTGGGGG TTTTGGTCCC ATCGTGATTA ATAACCGTGA CATTATTCCT ATCCCTTTCC CACAGCCTGA CGGCGAACTC ATCTTCATTA TTGGTGATTG GTACACTCAG GACCATAAAG CATTAAGGAG AATACTCGAC TCTGGGAAAG AACTTGGGAT GCCAGATGGA GTCCTCATCA ATGGGAAGGG TCCTTACAAG TACAACAGTA GTGTACCTGA TGGAATTGAT TACTTAACCT TTCATGTTGA GCCAGGGAAA ACATACAGAA TCCGTGTTCA CAATGTTGGG ATCTCGACAA GCTTGAACTT CAGGATTCAG AACCACAATT TGCTTTTGGT AGAAACCGAG GGTCACTATA CCTCACAGGC GAACTTTACT GATTTTGATG TTCATGTAGG ACAGTCTTAT TCTTTCTTGG TAACCATGGA CCAAAACGCC ACAAGTGACT ACTACATTGT TGCCAGTGCT AGATTTGTGA ATGAAACAGT GTGGCAAAGA GTCACTGGTG TTGCCATTCT CCATTATTCT AATTCCAAAG GACCTGTTTC TGGTCCTCTA CCAGTTCCAA AAACCGATGT TTCTAGCCCA TGGTCAGCAA TGAACCAGCC GAAGGCCATC AGGCAAAACA CATCTGCTAG TGGAGCTCGT CCAAATCCGC AGGGATCATT TCACTATGGT CAAATAAACA TCACTAACAC ATACATTTTG AGAAGTTTGC CTCCAACAAC AATTAACGGG GCACTACGTG CTACACTTAA TGGGATTTCA TTTGTGAATC CAAGCACTCC AGTGAGGCTT GCGGATCGCA ATAAAGTGAA AGGAGCTTAT AAGCTGGACT TCCCTGATAG ACCTTTTAGT AGACCTCCTC GTTTGGACAG ATCTATGATC AACGCAACAT ACAAGGGCTT TATACAAGTT GTTTTCCAGA ACAACGACAC CAAGATCCAG AGCTTCCATG TTGATGGATA TTCATTTTTT GTTGTTGGGA TGGACTTTGG TATCTGGTCA GAAGACAAAA AGGGTTCATA TAACAACTAT GATGCCATCT CAAGAAGCAC AATCAAGGTA TACCCTGGGG GATGGACGGC TGTACTTATT TCCCTTGATA ACGTTGGAGT TTGGAACATT CGAGTAGAGA ATCTTGACAG ATGGTATCTT GGTGAAGAAA CTTATATGCG GATCACAAAC CCCGAAGAGG ATGGAAAGAC AGAGATGGAT CCTCCTGACA ATGTCCTTTA CTGTGGTGCC CTTAAGAACT TGCAGAAGGA ACAACACCAC TCAGCTGCAA CATCTATACT AAATGGACAC TTGAAGCTAA TGCTAATAGT GTTACTCGCC TCGGTTATGA CATTTTGCTA AGCCTTTTTA CATCTTTCTG CCGGGGAAGT GAGGTAGTAG ACGTTAAATG ATATTTAGAT TTATTTATCC CCATGGGCCA TGGATGTGAA CAACTCTTGG TTCTTTTGTT GTTTTAGGCC AAAATGGTTT AGCATCTTCT CAATTGTAAT GAAAATCCTT CATGTTTCTC CCATCTTATA CCACATTATT TTCTCATTGT TGGATTTTCT CTATCTT 
Length2097
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6729265.. 6732705
Download Sequence
A.thaliana
AGI-codeAT4G25240.1
DescriptionSKU5 similar 1
TAIR curator summaryEncodes GPI-anchored SKU5-like protein.
Alias[SKS1][SKU5 similar 1]
Gene coexpression
MR
MR Locus Description
41.0244 Ahg357417 Protein kinase superfamily protein
68.2056 Ahg951906 MATE efflux family protein
77.711 Ahg341711 phosphatidic acid phosphatase-related / PAP2-related
89.2188 Ahg494446 proline-rich family protein
92.3688 Ahg493181 Protein kinase superfamily protein
94.1913 Ahg939469
94.5939 Ahg491173 Phosphorylase superfamily protein
97.6832 Ahg496986 Chalcone-flavanone isomerase family protein
98.8332 Ahg476935 putative protein kinase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression