Detail



ID : Ahg492421

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492421|fgenesh2_kg.7__1854__AT4G24290.2
Sequence
TTTTGATTAA CAAAACTAAT TTACTGCTCC TCCATTGAGG GTTTTCTTCT TCTTCTTCTT CAACCTCCTT TGCTGCTAAG ATTCAGCTCC ATGTCTCTGC AATCCTAGTC CGTTGATTTA GGATTCGTTT AGATCGTGGT TTTTGAGCTC TGTTGAAGAT TCTCTTGAAG ACATATGCTT CAAAACGTAT AAGTCTTGTA CTGAATCATG GCACTACGGC TACCAGCTTC TAAAGCAGCT GAAGTTGCGA TTGGATCGAT TGGCTGCGGT TATGATCTAG CTATTGATGT AAGGTTGAAG TATTGCAAAG GAGGTTCTAA AGATTCTAGA TTACTTGATA TCAAAGAAGG TGATGACAAT TGTGAGATTG TTTTACCTGG TGGAATCTCC ATTCCTAATG TTTCCAAGTC TATTAAATGC GATAAAGGGG AGCGTATGCG GTTTAGGTCC GATATTCTTC CTTTCCAACA GATGGCAGAG CAGTTCAACC AGGAACTATC TTTGGCTGGT AAAATCCCGT CAGGTCTCTT CAATGCGATG TTTGAATTCT CGAGCTGTTG GCAGAAAGAT GCAGCCTATA CCAAAAACCT TGCTTTTGAT GGGGTATTCA TCTCATTATA CACGGTTGCT TTGGACAAAT CTCAAGTGTT ACTCCGTGAG CATGTTAAGC AGGCTGTTCC ATCAACATGG GACCCTGCTG CATTGGCAAG GTTTATAGAT ATTTATGGGA CGCATATAAT TGTTAGTGTG AAGATGGGAG GAAAAGATGT GATTTATGCA AAACAACAAC ACTCCTCAAA ACTTCAGCCT GAGGATCTGC AGAAAAGGTT AAAAGAGGTG GCAGATAAGA GGTTCATTGA AGCTAGCGTA GTGCATAATA CGGCTTCAGA AAGAGTACAT GCAAGTAGTA AGGTGGAAAC AAAGGAGCAA CGCCTGAGAT TTGCAGATAC CAGTTCGTTG GGCTCTTATG CAAATAAGGA GGACATTGTC TTCATGTGCA AAAGGCGAGG TGGAAATGAT AATAGAAATC TAATGCATAA TGAATGGCTG CAAACAGTTC AGATGGAGCC TGATGTTATC TCAATGTCCT TTATTCCAAT TACGTCTTTG CTCAATGGAG TTCCAGGAAG TGGATTCTTA AGCCATGCCA TAAATCTGTA TCTAAGATAT AAGCCACCGA TTGAAGAGCT GCATCAGTTT CTAGAGTTTC AGCTACCAAG GCAGTGGGCA CCCGTGTTTA GTGAACTTCC TCTTGGTCCG CAACGGAAGC AACAAAGTTG TGCATCTCTG CAATTCAGTT TCTTCGGACC TAAGCTCTAT GTGAATACGA CTCCGGTTGA TGTTGGTAAG AGGCCAATCA CTGGGATGCG GCTCTACCTA GAGGGTAGAA GAAGCAACCG TTTGGCAATT CATTTGCAAC ACCTTTCCTC TCTTCCCAAG ATATATCAGC TCGAAGACGA TCTAAATAAA AGTGTCCGGC AAGAGGCGCA TGATCGTCGA TACTATGAGA AAGTAAACTG GAAGAACTAC TCTCACGTCT GCACAGAACC CGTCGAATCA GATGATGATC TTTCTGTAGT AACAGGTGCG CAGCTTCATG TAGAAAGCCA TGGATTCAAG AACGTGCTCT TCTTGCGCCT TTGTTTCTCT AGAGTTGTGG GAGCAACACT TGTAAAGAAT TCTGAATGGG ATGAAGCGGT AGGCTTTGCT CCAAAATCAG GACTCATCTC AACGCTAATA AGCCATCACT TTACTGCAGC ACAGAAACCA CCACCAAGAC CTGCAGATGT GAATATAAAC TCGGCTATCT ACCCTGGCGG GCCACCAGTA CCCACACAAG CTCCCAAACT TTTGAAATTT GTGGATACAA GTGAGATGAC GAGAGGACCG CAAGAATCAC CCGGGTATTG GGTTGTATCA GGTGCAAGAT TACTGGTGGA GAAAGGCAAA ATATCATTGA AGGTGAAGTA TTCTCTATTT ACTCCAATAT TGGGAGATGA AGTGAGTGAG GAACCCTATG AATGTTAAGT GGAAATGGTG GTTGTGTGGC TCAAAAATAG GATGGGTGGT A 
Length2071
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7115213.. 7118884
Download Sequence
A.thaliana
AGI-codeAT4G24290.2
DescriptionMAC/Perforin domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg479152 response regulator 1
5 Ahg329195 modifier of snc1
6.7082 Ahg488346 SIN3-like 2
6.7082 Ahg933499 pentatricopeptide (PPR) repeat-containing protein
7.74597 Ahg491213 GTP binding protein beta 1
8.48528 Ahg495205 Tetratricopeptide repeat (TPR)-like superfamily protein
11.7898 Ahg342166 pumilio 5
12.1655 Ahg481680 P-loop containing nucleoside triphosphate hydrolases superfamily protein
15 Ahg492913 VPS54
17.8606 Ahg489126 Adaptor protein complex AP-2, alpha subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression