Detail



ID : Ahg492439

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492439|fgenesh2_kg.7__1872__AT4G24210.1
Sequence
TTTTTTCTCC ATCTCTCCTC TCAAATCAAA CAACTCTGAT CTTCGCTAAT CAATTCCACA TGAAGCGCAG TGCTACCGAC TCTGATCTGG ACGGTGATGC TCATAACGAG ACACACAAGA AGATGAAGAG TACGGAGGAA GAAGATTCAG AAATCGGATT CTCCAATTTA GACGAGAATC TAGTGTACGA GGTATTGAAG CACGTAGACG CAAAGACCTT AGCTATGTCT TCTTGCGTGA GCAAGATCTG GCACAAAACG GCACAAGACG AGCGGCTTTG GGAGCTGATC TGTACTCGTC ACTGGACTAA CATCGGCTGC GGCCAAAACC AGCTCAGATC TGTGGTCTTG GCCCTTGGTG GCTTCCGACG TCTCCACTCA CTTTACCTCT GGCCTCTCTC TAAACCTAAT CCGCGTGCTA GATTCGGTAA AGACGAGCTT AAACTCACTC TTTCTCTTCT CTCAATTCGA TACTATGAGA AGATGAGTTT CACTAAGAGA CCTCTCCCAA ACTCTAATTA ATTACTTACA AATTCTTAGG GTTTATTTGG TTTTATCTTT TGTGTGTTTG GAGTTTGTTG ATTGATAAGT GTGACGTGAT GTGATGCTCA AAGCTGGCAA TAAAATTTGT TGTATTCATA GCCAGACTGT TAGCAACAGT TGTTGTTCTG TAATAATAAT AGAGGCTGAT GAGAATTATC AAATATGATT CGATTTTGTT GTTAATTGTT GTGTCGTGAA GTTAAGTTGG TCCGTAGTTG GACAATGATT GTAACAAAAT TGATTCGTGA TCCAAGTTGA TAAGATTAAG AACGGTT 
Length817
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7149199.. 7150012
Download Sequence
A.thaliana
AGI-codeAT4G24210.1
DescriptionF-box family protein
TAIR curator summaryF-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.
Alias[SLY1][SLEEPY1]
Gene coexpression
MR
MR Locus Description
19.8242 Ahg475389 FAD/NAD(P)-binding oxidoreductase family protein
30.8545 Ahg496973 GATA transcription factor 5
32.1559 Ahg943453
35.6511 Ahg901754 ENTH/VHS/GAT family protein
37.6032 Ahg477487 TCP-1/cpn60 chaperonin family protein
42.2137 Ahg910852 WAPL (Wings apart-like protein regulation of heterochromatin) protein
45 Ahg946382 Drug/metabolite transporter superfamily protein
49.4368 Ahg494051 EID1-like 2
50.3786 Ahg497150 ARM repeat superfamily protein
54.1849 Ahg494464 RNAse THREE-like protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression