Detail



ID : Ahg492527

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492527|fgenesh2_kg.7__1960__AT4G23460.1
Sequence
GGAGGAGAAG AAGTGTGGAG GTTGAAGAAG GGAGAAATGA GCGGTCATGA TTCGAAATAC TTTTCGACTA CGAAGAAGGG AGAGATCCCT GAGCTTAAAG AAGAGCTGAA TTCACAGTAT AAGGATAAGA GGAAAGATGC TGTTAAGAAG GTTATTGCGG CAATGACTGT TGGAAAGGAT GTTTCATCAC TTTTCACTGA TGTAGTCAAT TGCATGCAAA CGGAGAATCT GGAGTTGAAG AAGCTTGTTT ATTTGTATCT GATAAACTAT GCCAAAAGCC AGCCAGATCT TGCTATCCTC GCAGTTAATA CTTTTGTAAA GGATTCACAA GACCCAAATC CATTGATCCG GGCTTTGGCT GTGCGAACAA TGGGCTGTAT TCGTGTTGAC AAGATCACAG AATATCTGTG TGATCCTCTT CAGAAATGCC TAAAGGATGA TGACCCATAT GTCCGCAAGA CAGCAGCTAT TTGTGTTGCT AAATTGTTTG ACATAAATGC TGAATTAGTT GAGGATAGGG GGTTCCTTGA AGCCTTAAAG GATTTAATAT CAGACAATAA TCCAATGGTT GTTGCAAATG CTGTAGCAGC CCTTGCAGAG ATACAAGAGA ATAGTACTAG TCCCATATTT GAAATCAATA GTACCACCCT CACAAAGCTC CTTACAGCTT TGAATGAATG TACTGAATGG GGTCAAGTAT TTATATTAGA TGCTTTGTCG AGGTATAAGG CAGCTGATCC TCGTGAAGCT GAGAATATTG TTGAGAGAGT CACTCCAAGG TTGCAACATG CCAACTGTGC TGTTGTGCTT TCAGCTGTTA AGATGATCCT TCAGCAGATG GAGCTTATTA CTAGTACAGA TGTGATTCGA AATCTTTGCA AGAAGATGGC TCCTCCCCTA GTTACATTGC TTTCTGCAGA ACCTGAGATA CAGTATGTTG CACTTCGTAA CATTAACCTT ATTGTCCAAA AGAGACCAAC TATTCTTGCC CATGAAATCA AGGTGTTCTT CTGCAAGTAT AATGATCCGA TTTATGTCAA GATGGAGAAG TTAGAAATTA TGATAAAACT TGCTTCTGAC AGAAACATAG ACCAGGTTCT TCTGGAGTTC AAAGAATATG CCACGGAAGT AGATGTAGAT TTTGTTCGGA AGGCTGTTCG TGCAATAGGC CGATGTGCCA TCAAACTAGA AAGAGCAGCT GAACGTTGCA TCAGTGTTTT ACTTGAGCTG ATCAAGATCA AAGTAAACTA TGTTGTTCAG GAGGCCATTA TAGTCATCAA AGATATCTTT AGAAGATATC CAAACACGTA TGAGTCCATA ATTGCAACAC TCTGTGAGAG TCTAGACACA TTGGATGAAC CAGAAGCTAA GGCATCTATG ATTTGGATCA TTGGTGAATA TGCTGAAAGA ATCGACAATG CGGATGAACT TCTTGAAAGC TTCTTGGAGA ATTTTCCTGA GGAACCAGCA CAAGTCCAGC TGCAGCTTCT TACAGCTACA GTCAAACTAT TTCTGAAGAA GCCAACTGAA GGCCCACAAC AAATGATTCA GGTTGTCTTG AATAATGCTA CTGTTGAGAC AGATAATCCT GATCTCAGGG ATCGTGCATA CATCTACTGG CGTCTTCTAT CTACTGATCC CGAGGCGGCC AAGGATGTTG TTTTAGCTGA AAAGCCTGTG ATTACTGACG ACTCAAACCA ACTTGATCCG TCGCTCCTGG ATGAGCTACT TGCAAATATA TCCACCTTGT CCTCTGTGTA TCACAAGCCG CCAGAGGCTT TTGTAACCCG CTTGAAAACC ACAGTTCAGA AAACGGAAGA TGAGGACTAT GTAGAAGGGA GCGAAACAGG ATACCCTGAG ACATCTGGTA ATCCGGTTGA TGGTGCAGCT TCCCCTGCAG CTACCACAGG CTATGTCCCA AAGTCAGCTG CTGCCCCAGC TCCTGTGCCC GATCTGCTTG GTGACCTAAT GGGGTCAGAT AATGCTGCAA TCGTCCCTGT AGATGAACCC ACAACTCCGT CAGGTCGCCC GCTTCCTGTT GTCCTGCCAG CATCAAAAGG TCAAGGTCTG CAGATTAGCG CTCAATTAAC CCGACAAGAT GGTCAAGTAT TCTACACTAT GCTCCTCGAA AACAACTCGC AGTCACTTCT TGATGGCTTC ATGATTCAGT TCAACAAAAA CTCATTCGGC CTTGCAGCTG TCGGACCTCT CCAGGTTCCG CCTCTGCAAC CCGGAGCATC TGCCAGGACA ATGTTGCCAA TGGTATTGTC CCAGAACATG TCTGCTGGGC CCACCAGCTC GGTATTGCAA GTTGCCGTAA AAAACAACCA GCAGCCTGTC TGGTACTTCG AGGATAAGAT TGTACTTCAT GCTCTTTTCT CAGAAGATGG TAGGATGGAA CGCGGGACCT TCCTCGAGAC ATGGAGATCG TTACCGGATT CAAACGAAGT CCAGAAGGAA TTCCCCGGGA TAACCATCAC GAGCGTGGAG TCAACACTTG ATTTGCTTGC CGCATCAAAC ATGTTCTTCA TAGCAAAGCG TAAAAACGGA AACCAAGACG TGCTGTATCT TTCAGCCAAG GTACCAAGAG GCATACCGTT CTTGATCGAA CTAACGGCCA TGGTGGGTCA ACCTGGTCTG AAATGTGCAG TCAAGACTCC AACTCCTGAG ATCGCTCCTC TCTTCTTTGA AGCCGTCGAA ATTCTCTTCA AAGCTTGAGA TTTTGATTTT ACACTGTCAA AAAGGTAACA AATTTTTTCT TTTAGTGTAT GTAGTAAGTG ATTATTCTCG AAAGAGCTTT TGATTTTTTT TATGTTGTTG CGTATATGCC CAAAATGTTT TTTGATTAAC TAGTAGTGTG ATGATGACTT ATTATCAACA AATGCTATTT TTAGTGTTC 
Length2899
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7523080.. 7528399
Download Sequence
A.thaliana
AGI-codeAT4G23460.1
DescriptionAdaptin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg479458 PTEN 2
7.07107 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
8.30662 Ahg488249 SWIB/MDM2 domain superfamily protein
10.7703 Ahg485406 Transducin/WD40 repeat-like superfamily protein
13.2665 Ahg490336 exocyst complex component sec15B
19.3649 Ahg493105 RNA-binding (RRM/RBD/RNP motifs) family protein
28.1425 Ahg475645 splicing factor-related
29.3258 Ahg319616
30.2985 Ahg943964 SAP domain-containing protein
31.241 Ahg487516 Protein of unknown function (DUF810)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression