| Annotation |
|---|
| Description | jgi|Araly1|492714|fgenesh2_kg.7__2147__AT4G21610.1 |
| Sequence |
GACATATTCG CCGGGAGCGA GACGGAAGGC GTGATGGAAG AGATACAAAC GCAGAAGAAG GAAGAACAAA AGCACCGTGA AACTGAAGAA GAAGAGGAGG AAGGACCTCC TCCGGGATGG GAATCTGCAG TTCTTCCTCC TCCAATCGCC ACCGTCACCG CCGCCGTAAA CCCCAATCCC ACCGCCGTCG AAATTCCCGA AAAGGCGCAA ATGGTATGTG GATCTTGCAG GCGTTTACTT TCGTATCTAA GAGGATCCAA ACATGTCAAG TGCTCGTCTT GTCAAACTGT TAATCTCGTT CTTGAAGCTA ACCAGGTTGG TCAGGTGAAC TGCAACAATT GTAAACTGCT CCTGATGTAT CCTTATGGAG CTCCATCTGT TAGATGTTCC TCCTGCAATT CTGTCACAGA TATCAGCGAG AACAACAAAC GACCTCCATG GTCTGAACAG CAAGGACCAC TCAAAAGTAT AAGCAGTATC CGGTGAGCAG AGAATTAAAC TTGAACCGAT TTTTGGTCAA TTTTGAACCG GTTTGATGAC TAAAAAAACT TGTAATAATG TGAAGGATAG ATGAAACAAA ATCACCATTA GTAATCT |
| Length | 597 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 8566266.. 8567481 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G21610.1 |
| Description | lsd one like 2 |
| TAIR curator summary | Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains. |
| Alias | [LOL2][lsd one like 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 41.1461 |
Ahg479631 | Pyridoxamine 5'-phosphate oxidase family protein |
| 49.6588 |
Ahg476277 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 53.4416 |
Ahg915596 | Major facilitator superfamily protein |
| 53.619 |
Ahg944247 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
| 54 |
Ahg496506 | |
| 70.1997 |
Ahg495004 | PAS domain-containing protein tyrosine kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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