Detail



ID : Ahg492741

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492741|fgenesh2_kg.7__2174__AT5G34837.1
Sequence
GATTCAATGA ATCCATATCA TCATACTTCA AGCTTTATAA ACCTGTTGAA CAGTCAAGAT GACAGTCACA TTCTCCCACC AAATCCATAT GAATGCTTGG AACTTGGATC AACAAATGTC CATGTGTTTA GCACTGAGTG GTCTGATGAT GATCCAAGTG AAGATGAAGC ACCAATTGCT GGGAAGAAAG GGAAGAAAGC CAAGAAACCA AGGAGGAATT GGTCATCAAC TGAAGATGTT GTTCTCATAA GTGGGTGGCT GAACACTTCC AAGGATCCGG TGGTGGGCAA TGAGCAAAAG GGGGCAGCGT TCTGGGAACG TATAGCAGCC TACTACAACT CAAGTCCCAA GCTCAAAGGT GTGGAAAAGA GAGGCCACAT ATGTTGTAAA CAGAGGTGGT CATAAGTGAA TGACGCCGTG AACAAGTTTG TAGGGAGCTA CTTGGCCGCA AGCAAACAAC AAACAAGTGG TCAGAATGAT GATGATGTGG TGTCTATGGC ACATCAGATC TTCTCGAAAG ATTATGGCTG CAAGTTTACT TGTGAGCATG CGTGGAGGGA GCTTAGATAT GATCAAAAGT GGATTGCTCA GTCTACTCAT GGGAAAGCAA AGAGAAGAAA ATGTGAAGCT GACTCTGACT CTGTTGGCGT TGAAGATAAG GAAGCTCGTC CCATTGGTGT TAAGGCTGCC AAAGCCGCAG CCAAAGCCAA AGGCAAAGCC AAGCTAAGTC CGGTTGAAGG TGAAGAAACC AATGCTTTGA AGGAGATACA AAGTATCTGG GAGATAAAAC AGAAAGATCA CG 
Length802
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8666083.. 8666884
Download Sequence
A.thaliana
AGI-codeAT5G34837.1
Descriptiontransposable element gene
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.8564 Ahg944327 zinc finger (C2H2 type) family protein
31.1769 Ahg486550 Protein of unknown function (DUF1442)
31.3369 Ahg950383 Auxin efflux carrier family protein
35.3553 Ahg486605 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
37.7094 Ahg942130 Leucine-rich repeat (LRR) family protein
39.0512 Ahg337008
53.2165 Ahg916260
53.5164 Ahg945551 stress-associated protein 10
66.5883 Ahg917658 subtilase 4.13
66.6708 Ahg931324
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression