Detail



ID : Ahg492917

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492917|fgenesh2_kg.7__2350__AT4G19440.1
Sequence
GGCGGCTCTT CTCTATTTCC CTAAGATCTC TTCACAAATG ACTTCCTCAC ATTTCTTCTC TTTCTCACCA ATGGATTTGA GGAGACTCTC TCGCACAAGC TACTTATTCA CTCGCCGCTT GAAATCCATA GCGAAAGCTC GAAAAAGCTT CCATACAACT CGATACCTGC AACAGTGCGT TCATCGGCTG GATAAATCGG AAGAGATTTC CTCTGATCGG CATTTACACG AACGGTTATC ATCAGTTTTG TCGAAGAGAT CTCTAGATTA CGAGCAATGT AAACAACTGA TAACTGTTTT ATCGCCTCAT GAATTCGATA GGTTGTTTCC TGAGTTTCGA TTCAAAGTGA ATCCCAAGAC GGCTTTGGAT TTCTTCCGAT TAGCTTCTGA TTCATTTAGT TTCTCCTTTA GTCTCCGTTC TTATTGTTTA TTGATAGGTT TATTGCTTGA TGCGAATCTG TCGTCCCCTG CTAGGGTAGT TTTGATTCGT TTGATCAATG GGAATGTACC GGTTTTGCCT TGTGGTAATG GTGGTTTGAG AGATAGTAGA GTTGCGATTG CGGATGCAAT GGCGAGTTTG AGTTTGTGTT TTGATGAAGA AATCAGAAGG AAAATGTCAG ATTTGTTGAT TGAAGTTTAT TGCACTCAGT TCAAGCGTGA TGGTTGTTAT TTAGCTCTTG ATGTATTTCC TGTTCTTGCA AACAAGGGTA TGTTTCCTTC TAAGACGACT TGCAATATTT TGCTGACTTC TTTAGTGAGA GCTAATGAGT TTCAGAAGTG TTGTGAAGCT TTTCATGTTG TTTGCAAAGG GGTTTCTCCG GATGTTTACT TGTTCACTAC AGCGATTAAT GCCTTTTGCA AGGGAGGGAA AGTTGAGGAG GCCATTAAGT TGTTCTCAAA AATGGAAGAA GCGGGTGTTG TACCAAACGT TGTTACCTAC AATACTGTTA TTGATGGGCT TGGGATGAGT GGAAGGTATG ATGAGGCATT TAAGTTTAAA GAAAAGATGG TAGAAAGAGG CGTGGAACCA ACTCTTATCA CTTATAGTAT TCTTGTCAAG GGTTTGACCA AGGCTAAGAG GATTGGTGAT GCTTATTGTG TCTTGAAGGA AATGACAGAG AAAGGGTTTC CTCCTAATGT TATTGTATAT AATAATCTGA TTGATAGTTT AATTGAGGCT GGAAGTTTGA ACAAAGCTAT TGAGATAAAG GATCTCATGG TTTCGAAAGG GTTGTCTCTC ACATCGTCGA CGTATAATAC TCTCATAAAG GGATACTGCA AGAGCGGTCA AGCAGATATT GCTGAGCGTC TCCTGAAGGA AATGCTGTCG ATTGGTTTTA ATATAAATCA GGGCTCCTTT ACATCTGTGA TTTGCTTGTT GTGCAGTCAT CATATGTTTG ACTCAGCACT TCGTTTTGTT GGAGAGATGC TACTACGTAA CATGAGTCCT GGTGGTGGAT TACTTACTAC ATTGATTTCT GGTCTCTGTA AGCATGGGAA ACACTCAAAG GCAGTAGAAC TTTGGTTTAA ATTTCTAAAT AAAGGTTTCC TAGTAGACAC GAAGACTTCA AATGCTTTGC TTCATGGACT CTGTGAAGCA GGGAAGCTGG AAGAAGCTTT TAGGATTCAA AAGGAGATAT TAGGGCGTGG CTTTGTTATG GATAGAGTTT CCTATAACAC GTTGATTTCT GGATGTTGCG GAAATAAGAA ATTAGATGAA GCTTTTATGT TCATGGATGA AATGGTTAAG AGAGGACTTA AGCCTGACAA TTATACATAT AGCATATTAA TTCGCGGGCT GTTGAATATG AATAAAGTTG AGGAGGCCAT ACAGTTCTGG GGTGATTGTA AACGGAATGG CATGATTCCA GATGTTTATA CATATTCGGT GATGATAGAT GGATGTTGTA AAGCTGAAAG AACAGAAGAG GGTCAGAAAC TGTTTGATGA GATGAAGAGC AATAACGTGC AGCCAAATAC TGTTGTTTAC AATCATCTAA TTGGAGCGTA CTGTAGAAGC GGAAGGCTAT CGATGGCCTT GGAACTCCGT GAAGATATGA AACACAATGG AATTTCACCT AATTCTGCTA CATATACTTC ACTAATAAAG GGGATGTCGA TCATTAGCCG TGTTGAGGAG GCAAAACTCC TCCTCGAGGA GATGAGGATG GATGGTTTGG AACCGAATGT CTTTCATTAT ACAGCACTTA TTGATGGATA CGGTAAATTG GGTCAGATGG TCAAAGTTGA ATGTCTTCTG CGTGAGATGC ATTCAAAGAA CGTACACCCA AACAAGATTA CCTACACTGT GATGATTGGT GGGTATGCTA GAGATGGGAA TGTAACAGAA GCTTCTAGGC TTCTAAATGA GATGAGGGAA AAAGGAATTG TACCAGATAG TATCACATAC AAAGAATTTA TATATGGATA TCTTAAGCAG GGAGGTGTTT TGCAAGCTTT GAAAGGCTCT GATGAAGAAA ATTATGCCGC AATAATTGAA GGATGGAACA AACTCATTCA GTAACTGATG AATAAGTAGA AGAAAAGTGG CAAATTGATA TCCAGTGGTG TTCTCAGTTT TGATGGTCTT GTTCACGCCC GGGATATGCG TCTTCTTCTT AGAGTAGGAA CACGTTAGGA TGGGTGAATG CATATGGTCC ATTGCATCTT ACAAGGAGGT TAGTGTGTTC TACTTGATTC TCCAGCCACA TTCACTTAAC AGCTTCGGCC TTCTTCAATT TTGGGGAGAA AGTTGTTGCT TTTAGCATCA TAGGCTATAT GGGTTTATGA TTTACAAATC CACATTACTG GTGCTCGTCA GGTTTATGAT TGAGTGCCAC AAGATCAAAG CCATATGATA GATTCTGGAT CAGAGCAGGC ACTTCAGACA GCAGTCCTGA AAAGATTATA CAGATTTAGA CACACATCAT GGACAGTCAA TTAAAAGTTT ACACATGGAT ATTCATGGGA GCTATGAGAG TGGATCAATA GGTGGCTCTT CTATTTACAG GTCATATAAA TAGATCTTAA GCGAGTTTTC ATCGGAGTAG TTTAGAACTA ATTCATGCAT GACACGTCGC TGGGGAAAAT TTCCTCAGAC GTGCAGAATT TTTGCCCCCG GAGATTAGTG GATTGATATG AAAGGTAACA TTTTATTACG GTTTCAACTA ATTCGACAGC ATTCACCGCC GAGTAAAGAC TTTCGGTGGG ATGAATTTCT TCTTGTATAC GATTCTTT 
Length3238
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9535521.. 9539124
Download Sequence
A.thaliana
AGI-codeAT4G19440.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
47.697 Ahg483018 type one serine/threonine protein phosphatase 4
50.5964 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
52.0769 Ahg324042
65.4064 Ahg481885 anthranilate synthase 2
71.4143 Ahg935201 P4H isoform 1
77.5564 Ahg493513 winged-helix DNA-binding transcription factor family protein
89.7775 Ahg479410 clast3-related
92.4175 Ahg336756
94 Ahg478912
96.1873 Ahg476537
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression