| Annotation |
|---|
| Description | jgi|Araly1|493030|fgenesh2_kg.7__2463__AT4G18350.1 |
| Sequence |
AAAACAAAAG CCATGGCTTC TCTTCTTGCA ATGTCGATGT GTGGTACTAA AACATGGCCT CAAGCCCAAA TTGATTTGGG TTTTAGGCCC ATTAAAAGAC AGCCGAAGAT TATTAAATGC ACGGTGCAGA TCGACGTTAC GGAATTAACT CAAAAACGCC AATTATTTAC ACCCAGAATC ACCGCTACTC CGCCGCAGCA TAATTCTCTC CGGCTAAACA TCTTCCAGAA AGCGGCGGCT ATTGCGATCG ACGCGGCTGA GCGGGCGTTG ATCTCACGTG AGCAAGATAC TCCTCTTCCC AAAACCGCCG ATCCACGTAT TCAGATCGCT GGGAATTATT CTCCGGTGCC GGAATCTCCC GTCCGGCGAA ATCTCACCGT CGAAGGAACA ATCCCTGACT GCATTGACGG AGTTTATATC CGTAACGGCG CTAATCCGAT GTTTGAGCCA ACAGCTGGGC ACCATTTATT CGACGGAGAC GGAATGGTTC ACGCTGTTAA AATAACCAAC GGTTCAGCTA GCTACGCGTG CCGGTTTACA AAAACCGAGA GATTGGTTCA AGAAAAACGA TTGGGTCGAC CGGTTTTCCC GAAAGCAATC GGTGAGCTTC ACGGCCACTC GGGAATCGCA CGTTTGATGC TGTTTTACGC ACGTGGGCTT TGTGGTCTCA TCAACAACCA AAACGGCGTC GGAGTAGCAA ATGCCGGTTT GGTTTATTTC AATAATCGGC TTTTAGCTAT GTCGGAAGAC GATTTTCCGT ACCAATTAAA AATAACACAA ACCGGTGATC TCCAAACCGT TGGACGTTAC GATTTCGACA ATCAGTTAAA ATCCGCGATG ATTGCCCACC CGAAACTCGA CCCGGTTACG AAGGAGCTTC ACGCGTTAAG CTACGACGTC GTTAAGAAGC CTTACCTGAA ATACTTCAGA TTTTCACCGG ACGGCGTTAA ATCGCCGGAA TTGGAGATCC CGCTCGAAAC TCCGACGATG ATTCACGATT TTGCTATAAC GGAGAATTTC GTGGTGATTC CGGATCAACA AGTCGTGTTT AAGCTCGGCG AGATGATTTC CGGTAAATCT CCGGTGGTTT TCGACGGAGA AAAGGTTTCG CGATTAGGGA TAATGCCCAA GGACGCAACG GAAGTTTCTC AGATAATCTG GGTGAATTCG CCGGAGACGT TCTGCTTTCA TCTCTGGAAC GCATGGGAAT CGCCGGAGAC GGAGGAGATT GTGGTGATCG GATCATGTAT GACGCCGGCG GATTCAATCT TCAACGAGAG AGACGAGAGC TTGAGAAGCG TCTTATCAGA GATCAGGATA AACCTCAGGA CGCGTGAATC CACGCGCCGT GCATTGTTGG TTAACGAGGA TGTTAATTTA GAGATCGGTA TGGTTAACCG GAACCGGTTA GGGAGAAAAA CCCGGTTCGC GTTTTTGGCT ATTGCTGATC CGTGGCCAAA AGTTTCGGGT TTCGCTAAGG TCGATCTTTG CACCGGTGAG ATGAAAAAGT ATATCTACGG CGGCGAGAAA TACGGCGGCG AACCGTTTTT CTTGCCTGGA AGTTCCGGTA ACGGCGAAGA AAATGAAGAT GACGGTTATA TATTCTGTCA TGTTCATGAC GAAGAAAAAA AGACGTCGGA ACTTCAGATT ATTAATGCCG TTAATTTAAA TCTTGAAGCT ACGATCAAAC TACCGTCAAG AGTACCGTAT GGGTTTCATG GCACATTTGT CGATTCGAGT GAACTCGTTG ATCAATTATG ATAATTATTG TACTTTTGAA TG |
| Length | 1782 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 10185002.. 10186783 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G18350.1 |
| Description | nine-cis-epoxycarotenoid dioxygenase 2 |
| TAIR curator summary | Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition. |
| Alias | [ATNCED2][NCED2][NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2][nine-cis-epoxycarotenoid dioxygenase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.59166 |
Ahg900448 | |
| 10 |
Ahg926124 | VQ motif-containing protein |
| 10.2956 |
Ahg918583 | Auxin efflux carrier family protein |
| 11.8743 |
Ahg934048 | cytochrome P450, family 710, subfamily A, polypeptide 1 |
| 15.2971 |
Ahg331046 | Serine protease inhibitor, potato inhibitor I-type family protein |
| 16.2481 |
Ahg323821 | Purple acid phosphatases superfamily protein |
| 17.9444 |
Ahg904497 | |
| 19.4936 |
Ahg491924 | |
| 21.6333 |
Ahg492419 | Protein of unknown function (DUF679) |
| 22.0454 |
Ahg927491 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|