Detail



ID : Ahg493274

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493274|fgenesh2_kg.7__2707__AT4G16120.1
Sequence
TTTTCATTAC AGCTTGCACT AACCCGGTCG CTTTATCAGT CATCATCTCT TCAAAAAGCT TCCATTTTTT TCAAATTCAA AATTTAGGGT TCATGGCTTT AGCTCCCAAC TTCATTCCTC CGCTACTTCT ACTCTCACTT CTTATCGTAT CAATTCCTCT AACGTCATCT CAATCCGACG CCAACACTAC TAATCCGCCA CCGTCAGATT CGGATCTATG CAACGGCGTA TTCATATCAT ACACTCACAC AAAAGGATCT AAGATCCCAC CCAACGACAC CGCAAATCAA CCCTACCGGT TCGAATCTGT GATAACAGTG CTCAACCACG GCCGCGACGA GCTCAAATCA TGGCGTGTCT TCGTCAAATT CGCTCACCGA GAGATCCTCG TGTCTGCTTT AAATGCTGTA CTCTCAGACG GCTCGAGCTT ACCTGTGAGC GTCGAAAACG GCACCGTATT CGCTGGTTAT CCTTCGTCGG ATTTGAAATC GGCTATTCAA ACGGCGGGTG ATGTCACTCA GATGCAAGCT CGTGTTGAGC TCGTTGGGAC TCAGTTCGGA GTTGCGCCGC CGAATGTTCC GCTTCCTAAG AACATCACTC TCGCTATTGA TGGATGGAAA TGTCCCAAAG CTACTCAAAA AGGTAAAAAT GTTCTGCAAG TATGTTGCAC GCCTGACCCA GACTATGATA ACACAGAGAT CATTGATAAT GAGTTCCTTC CTCGACAAGA TGGAGACCTT ACTATCATGT ACGATGTGGT CAGATCATAT TCATCGAATT ATATGGCACA AGTCACGATG GAGAACCATA ACCCGCTTGG CCGGCTGGAT AACTGGAAAC TGAGTTTTGA CTGGATGCGG GACGAGTTTA TCTACACCAT GAAAGGAGCT TACCCGAGTA TTGTTGATTC ATCAGATTGT GTTGATGGCC CACAGGCGAA GTACTTTCAA GATCTTGACT TTTCGAATGT GTTAAGCTGT GCAAGACGGC CAACCATCAT AGATCTCCCT CCTACGAAAT ACAATGATTC AACGTTCGGT CTTATCCCAT TTTGCTGCAG AAATGGGACG ATTCTACCGC GGTCAATGGA TCCTAGCAAG TCGAGCTCAG TTTTCCAGAT GCAGGTGTAC AAAATGCCTC CGGATCTCAA TATATCTGCT CTATCACCGC CTCAGAACTG GAGAATCAAC GGTACACTGA ACCCGGATTA CAAGTGTGGC CCTCCTGTTC GGGTGAGCCC GAGCCAATTC GCCGATCCCA GTGGGTTACC CTCAAACAGG ACTGCTTTTG CGAGCTGGCA GGTGGTCTGC AACATCACCC AACCAAAAGA TGCTAGTCCT AGATGCTGTG TATCGTTCTC TGCCTACTTC AACGACTCGA TCGTCCCGTG CAAGACTTGC GCTTGCGGTT GTTCCAGCAA CAAAGCAGCT CGCGCTTGCA GCACTACAGC CCCGTCTCTT CTTCTACCCC AGCAAGCTCT TCTGGTTCCA TTTGAGAACC GAACTGAACT CACTGGCGCT TGGGCTTATC TAAAACATCG GCCGGTGCCA AACCCAATGC CTTGTGGGGA TAACTGCGGG GTTAGCATCA ATTGGCATTT GGCTACAGAT TATCGAGGCG GATGGACAGC CCGGGTCACA GTCTTCAACT GGGGCGAAAC AGATTTTGTA GATTGGTTTA CCGCAATTCA GATGAAAAAC GCTGCCCCGG GTTTCGAGAA AGCCTACTCA TTCAATGCAT CTACACTTGG TATCAACGGG GAGAACAATA CTATTTTCAT GGAGGGCCTT CCCGGATTGA ATTATCTCGT AGCGGAAAGA GACGGGGAGA ATCCGTTGAA GAATCCTCGG ATTCCCGGGA AACAACAGTC TGTTATTTCC TTCACCAAGA AACTGACTCC TGGGATTAAT GTCCCTGGTG GAGATGGCTT CCCGAGCAAA GTGTTCTTCA ACGGTGAGGA GTGCTCTCTC CCAACCATAC TCCCAGTGAG AAGCAGCCAA CACCGGAGAC ACATCTCTGC TTTCCTCCTT GCATTACCTG TGTTGGCTCT CTTGATTTTG CGGGTGTAAC TACACTGAAA CCTCCTGTTG GGTTGGCGAT ACAGTTTCTT GATTCTTCCC TCCGCGGTTT ATGGATGGAG AATCAATCGA TTCTTTTTCA ACCTGTGATA AGTGTTGGAA GAAGCTTTAT ATAGGTGCTA TGAAGATATA TATGTTACCA TTCTTGTATT GTTTAAGATT AGAGTTTTTC AGTAATCACT AATCAGTATG TATACTATAT TTTGTTTACT CTTTCTCGGC CATTGATTTG TTCCTAATCC TCTCCAAACC GGTATTCATA T 
Length2341
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11577979.. 11580889
Download Sequence
A.thaliana
AGI-codeAT4G16120.1
DescriptionCOBRA-like protein-7 precursor
TAIR curator summaryputative membrane-anchored cell wall protein
Alias[ATSEB1][COBL7][SEB1][ARABIDOPSIS THALIANA SEC61 BETA 1][COBRA-like protein-7 precursor][SEC61 BETA 1]
Gene coexpression
MR
MR Locus Description
17.8885 Ahg494617 Protein of unknown function (DUF3741)
18.3848 Ahg946659
20.8327 Ahg490375 Minichromosome maintenance (MCM2/3/5) family protein
21.7025 Ahg922252 Amino acid permease family protein
23.2379 Ahg473885 Protein phosphatase 2C family protein
27.3496 Ahg945124 glycine-rich protein
27.6767 Ahg945946 SKU5 similar 4
30.7409 Ahg472649 NHL domain-containing protein
35.5809 Ahg332797
37.0945 Ahg476531
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression