Detail


ID : Ahg493336

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493336|fgenesh2_kg.7__2769__AT4G15520.1
Sequence
AGAAGACGAC GACGATGGTG GGATTTGAGA GCTATGTGGT TGTTCACAAC ATAGCAAAGC GTCACAACGT CGGAACTTTA GCTCGTAGCG CTACTGCTTT TGGTGTGACG GAGTTAATCC TCGTGGGTCG CCGTGACTTC AACGCCTTCG GTAGTCATGG TTCAGCTTCT CACATCCGTT TCCGCCATTT TCACTCACTT ATCGAAGCTC GCACCTATCT CAAGGAGGAG AAAGATTGCG ATATTTGCGG CGTTGAGATT GCAGATGGAG CTTCTGCTGT TAACGAACAT CCTTTCAAAA GAAACACTGC GTTTCTTCTT GGTAATGAGG GATCAGGATT ATCTGCCAAG GAATATGAAA TTTGCGACTT CTTTGTATAT ATTCCTCAAT ATGGCTGTGG CACTGCCTCC TTAAATGTTA CTGTTGCAGC TTCTATCGTT TTGCATCATT TTGGAGTTTG GGCTGGATTT TCTGAGCGTG TCCGGGATGG AAGCAAATTT ATAGTGGCTG ATAGACCCGT AAGACAAGGA AGACGGAATT TCTGTGCCGG CACAGAAGAA TCCATCATTG AAGAGCGGAA GTTGAGGAAA GAAAGTGCGG AAAATGGTTT TTTCGATGAC GATGGAAACG GAAATGGAAG TTCATCATCC GACCTTTTGG ACGGTTTGTT CCTTGACGAA TAATTGTCTT TGAAAAAGAA CAAAAACTTG TTTTGGGTTC CAATCCTGGG AAGATGAGGC GCACACCCTT CAATATATAT TGTCAAGCGG AGTTAGCTTA CTCACGCTTG TTCATTCCCT AGTTACCGAA TCTTCGTTTC GCAAGTAGAG AAAGCTTATT GATTACGCGA AGTTGATTAC TTGGTTTTGA CTAATTGATC TGCCTTTGGT ATGATACTAT GCTTATGAAC ATGTTTGAAA TTATTTCAGT TGATAGAATC TCATTCCGCT G
Length951
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12025460.. 12027243
Download Sequence
A.thaliana
AGI-codeAT4G15520.1
DescriptiontRNA/rRNA methyltransferase (SpoU) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.1909 Ahg471082 Pseudouridine synthase family protein
15.1658 Ahg358310 glycine-rich RNA-binding protein 3
16.7332 Ahg481407 binding
21.8174 Ahg494938 Pentatricopeptide repeat (PPR) superfamily protein
22.1811 Ahg929889 pre-mRNA-processing protein 40C
23.3238 Ahg482091 ARM repeat superfamily protein
32.0156 Ahg472801 Metal-dependent phosphohydrolase
33.2265 Ahg929675 nuclear RNA polymerase D2B
33.8821 Ahg930461 FAD/NAD(P)-binding oxidoreductase family protein
38.0789 Ahg476390 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression