| Annotation |
|---|
| Description | jgi|Araly1|493439|fgenesh2_kg.7__2872__AT4G14670.1 |
| Sequence |
AAGCCCGGGG AGACCAGTGT GGGAGTAGAG GCATTGGTGA TTAGTCTTCT TGATGATTCT CAAATCAGGG ATTTGTTGAA AGAAGCTGGT TCTGTACCAG AGAAGGTTAA GTCTGAGGTG GAGAAGCTTG GTGGCGAGGT AAACCTTCAG GCTTTGAAGA CTTATGGGAT AGATTTGGTT GAGCAAGTAG GTAAGCTTGA TCCTGTCATT GGCCGAGACA AGGAGATTAG AAGAGTTGTT GGGATTCTCT CAAGGAGAAC CAAGAACAAC CCCGTGCTTA TTGGTGAGCC AGGTGTTGGA AAAACTGCTG TGGTTGAAGG TTTGGCTCAA AGGATATTGA AAGGAGACGT GCCTATCAAT CTTACCGATG TAAAGCTCTT TTCCTTGGAC TTGGGTGCAA TGGTTGCCGG AACAACACTA CGTGGACAAT TCGAAGAAAG ATTGAAGTCG GTCTTGAAAG AAGTTGAGAA TGCTCAAGGC AAAGTTGTTC TCTTTATCGA TGAGATCCAC ATGGCTCTTG GTGCTGGAAA GGCAAGTGGC TCCACGGATG CTGCTAATTT GCTTAAGCCT ATGTTAGCAA GAGGTCAGCT TCGTTGCATT GGTGCTACTA CGCTTGAGGA ATACCGAACA CATATCGAGA AAGATGCTGC ATTCGAGAGA AGGTTCCAAC AAGTGTATGT AGCTGAGCCT AGTGTCCCTG ACACTATCAG TATTCTTCGA GGGCTTAAAG AAAAATATGA AGGACACCAT GGTGTTCGTA TCCAAGACAG TGCTCTTGTT GTTTCTGCTC AATTGTCTGC GCGTTACATC ACTGCTCGAC GTTTACCGGA TAAGGCAATT GATTTGGTTG ATGAGTCTTG TGCACATGTG AGAGTCCAGC TTGATAGTCA ACCAGAAGAA ATTGATTACC TTGAAAGAAA AACAATGCAA CTAAAGATAG AGATTCATGC TCTCGAAAAG GAGAAGGACG ACAAAGCTAG CGAAGCTCGT CTTTACGAGG TGAGGAAAGA GCTTGATGAC TTGAGGGACA AGCTTGAGCC TCTTACAATA AAATACAAGA ATGAGAAAAG GATAATTAAT GAAACTCGGA GTCTTAAACA GAAACGAGAT GAGCTCATGA TTGCTCTACA AGAGGCTGAG AGACAATATG ACCTTCCTAA AGCTGCTGAT CTAAGATATG GGGCAATTCA GGAAGTAGAA TCCGCGATAG CAAAATTAGA AAAGAGTGTT AAAGATAACG TGATGCTTAC GGAAACTGTT GGGCCAGAGA ATATTGCTGA GGTAGTGAGC CGATGGACTG GGATTCCAGT GACTGCACTT GACCAGAACG AGAAGAAGAG GCTGATTTCT CTTGCTGATA GGTTGCACGA GAGAGTTGTT GGACAAGACG AAGCCGTGAA AGCTGTAGCT GCGGCAATTC TAAGGTCAAG GGTTGGACTA GGAAGGCCAC AACAACCATC TGGTTCCTTT CTTTTCCTCG GTCCAACTGG TGTTGGTAAA ACTGAGCTGG CTAAAGCTCT TGCTGAGCAA CTCTTTTACG ATGAAAACCT ACTTGTTAGG CTTGATATGT CGGAGTATAT GGATAGATCC ACTGTTAATA AACTTATAGG GGCACCACC |
| Length | 1619 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 12875638.. 12877444 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT4G14670.1 |
| Description | casein lytic proteinase B2 |
| TAIR curator summary | This locus was originally annotated as encoding ClpB2 (also referred to as Hsp92.7), which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. However, according to Lee et al. (2007, Plant Journal, 49:115-127), there is no evidence for expression of an appropriate-sized mRNA from this locus. Re-annotation of the genome indicates that this locus potentially encodes a 68.8-kDa protein, containing only the N-terminal two thirds of the originally predicted open reading frame. This locus contains a 626-bp deletion in WS ecotype compared with the Col ecotype, which eliminates residues 1-86 of the predicted protein. |
| Alias | [CLPB2][casein lytic proteinase B2] |
| Gene coexpression |
|---|
| MR |
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| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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