Detail



ID : Ahg493523

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493523|fgenesh2_kg.7__2956__AT4G13890.1
Sequence
AGAGATGGAA TCAGTCTCTT CTTGGGGAAA CACGCCTCTT GTCTCCGTCG ATCCCGAGAT CCACGACCTA ATCGAGAAGG AGAAACATCG GCAATGTCGA GGAATCGAAC TCATAGCCGC CGAGAATTTC ACTTCCTTGG CTGTCATGGA AGCTCTTGGA AGTGCCTTAA CCAACAAATA CTCGGAAGGT ATGCCTGGTA ATCGTTACTA CGGAGGTACC GAGTTCATCG ATGAGATCGA GAGTCTCTGC CGCTCACGCG CTCTCGAGGC TTTCCATTGT GATCCAGAGA AATGGGGCGT TAATGTTCAG CCTTACTCTG GTTCTCCTGC AAACTTCGCC GCCTACACGG CCTTGCTCCA GCCTCATGAT CGTATCATGA GGCTTGATCT GCCTTCAGGT GGTCATCTAA CGCATGGTTA CTATACCTCT GGTGGGAAGA ATATATCCGC GACCTCGATC TACTTCGAAA ACCTTCTGTA CAAGGTGGAT TCCACCACTG GTTACATTGA TTACGACAAG CTTGAGGAGA AAGCAATGGA TTTTAGGCCT AAGTTAATCA TCTGTGGAGG CACTTCTTAC CCTAGGGAAT GGGATTACGC GAGGTTCAAA GTTGTCGCGG ATAAGGTTGG AGCTCTTTTG CTTTGTGATA TGGCTCACAT CAGTGGTCTC GTTGCTGCTC AGGAAGCTGC AGACCCGTTC GAGTACTGTG ACGTTGTGAC AACCTCAACT CACAAGAGTT TGAGAGGTCC AAGGGCTGGT ATGATCTTTT ATAGAAAGGG CCCAAAACCA GCCAAGAAGG GCCAACCCGA GGGTGAAGTC TACGATTTTG ACAAAAAAAT CAACTTTGCG GTGTTCCCTG CGCTTCAAAG TGGTCCTCAC AATAACAAGA TTGGTGCTCT AGCTGTTGCG TTGAAGCAGG CTATGGCTCC TGGGTTCAAG GTCTACGCAA AACAGGTGAA AGCCAATGCT GCTTGCCTTG GAAACTACCT AATGGGAAAG GGATATTGTA TTGTAACCGG TGGAACTGAT AACCACCTTG TTCTTTGGGA TCTTCGCCCT CTTGGATTGA CCGGTAACAA GGTTGAGAAG GTTAGTGAAT TGGGCTACAT TACTTTGAAC AGGAATGCGG TATTCGGAGA CACTAGTTTT CTTGCTCCTG GAGGTGTAAG AATCG 
Length1175
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13625395.. 13627092
Download Sequence
A.thaliana
AGI-codeAT4G13890.1
DescriptionPyridoxal phosphate (PLP)-dependent transferases superfamily protein
TAIR curator summary
Alias[EDA36][EDA37][SHM5][EMBRYO SAC DEVELOPMENT ARREST 37][EMBRYO SAC DEVELOPMENT ARREST 36][SERINE HYDROXYMETHYLTRANSFERASE 5]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg494168
4.3589 Ahg471434 nucleotide binding
19.7484 Virus3928
24.98 Ahg906575 F-box and associated interaction domains-containing protein
25.4558 Ahg922227
33.5708 Ahg486713 Pectinacetylesterase family protein
34.6987 Ahg492333 Uncharacterised protein family (UPF0497)
42 Ahg952067 F-box family protein-related
44.0681 Ahg490074 RING/U-box superfamily protein
48.2494 Ahg914779
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression