Detail



ID : Ahg493579

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493579|fgenesh2_kg.7__3012__AT5G34930.1
Sequence
TCCAAAAGTC TATTCAAATG GCAGAGACAT GTTCCCTTCT CTCTCTCTCC GCCCACCAAA CCCCACCGCC GTCGTCACCG AAAACAACCC TCTTCCCAAT TCCGATCCAA TCCCTCCTCT CCGTATCGCC ATTATCGGAT TCGGCAACTA CGGTCAATTC CTCGCCGAAA CCCTAATTTC TCAAGGCCAC ATTCTCTTCG CTCACTCCCG ATCCGATCAC TCCTCCGCCG CTCGTCGTCT CGGTGTCTCT TACTTCGCCG ATCTTCACGA TCTTTGCGAA CGTCATCCTG ACGTAGTCTT ACTCTGTACT TCAATCCTCT CCATTGAGAA TGTTCTCAAA ACGTTGCCGT TTCAGAGACT CCGTCGCAAC ACTCTCTTCG TTGATGTTCT CTCTGTTAAA GAGTTTGCTA AAACTCTTCT CCTTCAATAC TTACCTGAAG ATTTCGATAT TCTTTGTACA CATCCAATGT TTGGTCCACA GAGTGTGAAT TCAAATCATG GTTGGAGAGG ATTAAGATTT GTGTATGATA AAGTTAGGAT TGGGGAAGAT AGATTGAGAA TCTCAAGGTG TGAGAGTTTT CTTGGTGTTT TTGAGAGAGA AGGATGTGAG ATGGTGGAGA TGAGTGTTAC TGATCATGAT AAGTTTGCTG CGGAATCGCA GTTTATAACG CATACTCTTG GTAGGCTTTT GGGGATGTTG AAGTTGCAAT CGACGCCGAT TAATACGAAA GGGTATGAGG CGTTGCTTGA TTTAGCTGAG AATACTTGTG GGGATAGTTT TGATTTGTAT TATGGGTTGT TTGTGTATAA TAAGAACTCG TTGGAGGTGT TAGAGAGGAT TGATTTGGCT TTCGAGGCAT TGCGTAAGGA GCTTTTTAGT CGACTTCATG GTGTTGTGAG GAAGCAGTCG TTTGAAGGTG AAGCAAAGAA GGTTCATGTT TTTCCAAATG GTTATGAAAA TGATGCTTCT TTGGATTTGA TGAGGTCAGA AGATGTTGCT GTGAAGTATG AATATAACCC CCAGGTCTCT GGCAGTGTTA ATGACGGTTC GAGGCTCAAG ATTGGTATTG TCGGGTTTGG TAATTTTGGA CAGTTTCTAG GAAAAACCAT GGTCAAGCAG GGTCACACTG TGTTAGCCTA TTCCAGAACT GACTACACTG ATGTAGCTGC GAAGCTGGGT GTCTCGTATT TTTCAGATCT TGATGATCTA TTTGAAGAGC ATCCTGAAGT TATTCTTCTC TGTACGTCAA TCCTTTCGAC TGAAAAAGTT CTCAAATCAC TCCCATTTCA GAGACTGAAG AGAAGCACAC TTTTTGTGGA TGTGCTTTCA GTAAAAGAGT TCCCGAGAAG TTTATTTCTT CAAACTCTAC CACAAGATTT CGATATTTTA TGCACACATC CTATGTTTGG ACCAGAGAGT GGTAAAAATG GATGGAACAA TCTTGCCTTT GTGTTTGATA AGGTTAGGAT TGGAATGGAT GATAGAAAAA AATTGAGGTG TGACAGTTTT CTTGATATTT TTGCCCGTGA AGGATGTCGT ATGGTGGAGA TGTCGTGTGC TGAACATGAT TGGCATGCTG CTGGATCACA GTTTATCACA CACTCAGTGG GAAGGCTTCT GGAGAAGCTG AGCTTGGAAT CTACTCCTAT CGATACCAAA GGTTATGAGA CATTGCTAAA ATTAGTGGAG AATACTGCTG GTGACAGCTT TGATCTTTAC TATGGACTAT TTTTATACAA TCCTAATGCA ATGGAACAGC TTGAGAGGTT TCATGTGGCT TTTGAGTCAT TGAAGAAACA GCTCTTTGGA AGACTACATT CACAACATTC TCATGAGCTA GCTAAATCAT CTTCGCCAAA GACAACTAAG CTATTAACTA GCTAAAGTTA GAGTTCTCTC AGTCTTGCTC CTTGATTACT AATT 
Length1924
Protein Sequence
Protein Residue
Map Locationscaffold_7: 16935406.. 16937586
Download Sequence
A.thaliana
AGI-codeAT5G34930.1
Descriptionarogenate dehydrogenase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.1489 Ahg937723 Major facilitator superfamily protein
27.9643 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
31.7805 Ahg477950 HCO3- transporter family
40.8412 Ahg934908 ubiquitin-specific protease 5
44.9889 Ahg481031 Sec23/Sec24 protein transport family protein
52.7826 Ahg478461 Paxneb protein-related
53.8516 Ahg913624
54.7996 Ahg474175 hexokinase-like 1
56.2583 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
58.6856 Ahg888834 helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression